Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20sp._20chipmunk_20LX- 2015_20[genbank_20GCA_5F000831705.1_202015-02-03] 853 sequences; 9,509,783 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq113 589 3e-163 seq579 361 7e-95 seq849 163 4e-35 seq445 138 1e-27 seq401 95.1 2e-14 >seq113 Length=180777 Score = 589 bits (652), Expect = 3e-163 Identities = 1109/1605 (69%), Gaps = 43/1605 (3%) Strand=Plus/Plus Query 195295 TCAAGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGA 195354 || |||||||||||| |||||||| || || ||||||||||||||||||||| |||||| Sbjct 159929 TCCAGCTATTGGTATTGATTTAGGTACCACATACTCATGTGTTGGTGTATGGAGAAATGA 159988 Query 195355 TCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTT 195414 | ||||| ||| |||| ||||| ||||| ||||||||||| ||||| || || || || Sbjct 159989 TACGGTAGATATTGTCCCAAATGATCAAGGTAACCGTACAACACCATCATATGTAGCATT 160048 Query 195415 TACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTAT 195474 |||||| | ||| |||||| |||| ||||| ||||| ||||| |||| || || Sbjct 160049 TACAGAAACTGAGCGTCTCATTGGTGATGCAGCAAAGAATCAAGTTGCTAGAAATCCAGA 160108 Query 195475 CAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCA 195534 ||||| || ||||| || || |||||||||||| | || ||| || || ||| || Sbjct 160109 GAATACAGTTTTTGATGCTAAACGTCTTATTGGTAGGAAATTTGATGACCAGGCAGTACA 160168 Query 195535 AGACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGAT 195594 | ||||| | ||||| | | | |||| ||| ||| || ||||| || || Sbjct 160169 AAGTGATATGACTCACTGGCCATTTAAAGTAGTTAGAGGTCCAAAGGACAAGCCAATCAT 160228 Query 195595 TAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGT 195654 || ||| | | ||||||||||| |||| | |||| || ||||| ||||||| Sbjct 160229 TAGTGTAAGCTATTTGGGTGAGAAGAAGGAATTCCATGCCGAGGAGATTTCTGCTATGGT 160288 Query 195655 GTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGT 195714 || ||||||||||| | | ||| | | | ||||| | | || |||| || Sbjct 160289 TTTACAAAAGATGAAGGAAATCTCTGAAGCATACTTGGGTCGCCCAATTAAGAATGCTGT 160348 Query 195715 TGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGC 195774 || |||||||| |||||||||| ||| |||||||| || || |||||||| |||| ||| Sbjct 160349 AGTTACTGTACCAGCTTACTTCAATGACTCACAACGTCAAGCAACAAAGGATGCTGGTGC 160408 Query 195775 TATTGCGGGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTT 195833 ||||| ||| | || ||| | ||||| || ||||| ||||| || ||||| ||||||| Sbjct 160409 AATTGCTGGTTTGAA-TGTAATGAGAATCATTAATGAGCCAACTGCAGCTGCTATTGCTT 160467 Query 195834 ATGGTCTGGACAAGAACAAGGA--CGAAGATAAAAATGTATTGATCTTTGATCTCGGTGG 195891 | ||||| || | || ||||| || || | |||||| |||||||| ||| | ||||| Sbjct 160468 ACGGTCTTGATA--AAAAAGGAACCGGTGAGAGAAATGTTTTGATCTTCGATTTAGGTGG 160525 Query 195892 TGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTAC 195951 |||||| |||||||| ||| | | | |||||| | |||||| || ||||| |||||||| Sbjct 160526 TGGTACTTTTGATGTATCATTATTAACTATTGAGGATGGTATTTTTGAAGTTAAGGCTAC 160585 Query 195952 TGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTC 196011 ||||||||| ||||| | ||||||||||| || ||| | ||| | | | ||| Sbjct 160586 TGCTGGTGACACTCACTTGGGTGGTGAAGACTTTGATAACAGACTTGT-AGAATTCTGTG 160644 Query 196012 T-GATGAGTTCCGTCGAAAGAATA-AG--AAAGATATTTCTGGAAATCCTAGGGCTCTTC 196067 | | || || ||||||||| || | || | || |||| |||| ||| | Sbjct 160645 TACAAGATTTTAAGAGAAAGAATAGAGGTATGGACTTAACTACAAATGCTAGAGCTTTAA 160704 Query 196068 GTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAA 196127 | | | || ||| ||| || ||||| || ||||| | || ||| | | || | | Sbjct 160705 GAAGATTAAGAACTCAATGCGAGCGTGCAAAGAGAACTTTATCATCTTCCACCCAGGCTA 160764 Query 196128 TGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACA---ACTATTACCCGTG 196184 |||| | |||||| | | || || ||||| ||| || | |||| | | Sbjct 160765 CTATTGAATTAGATTCGCTTTACGAAGGTATTGA---TTATTCAGTTGCCATTAGTAGAG 160821 Query 196185 CACGTTTTGAAGAGTTAAACTCTGATTTGTT--TAGGAAGTGTATGGAACCTGTTGAACA 196242 | | ||||| || | |||||| || | || | || | || ||||| | Sbjct 160822 CTAGATTTGAGGAACTCTGTGCTGATTATTTCCGTGCAACTTTA--GCTCCAGTTGAGAA 160879 Query 196243 AGTACTTCGTGACGCAAAGATGGATAAG---TCTAAGGTTGATGAAATTGTCCTTGTGGG 196299 ||| || || || ||||| ||| ||| || |||| ||||| | || || Sbjct 160880 AGTTCTCAAGGATGCTGGTATGGACAAGAGATCT---GTACATGATGTTGTCTTAGTTGG 160936 Query 196300 AGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGA 196359 || || ||||||||||| || |||| || || |||||||| ||| || Sbjct 160937 TGGCTCTACCCGTATTCCAAAAGTTCAGGCTTTGATTCAGGAATTCTTCAACGGTAAGGA 160996 Query 196360 TTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGC 196419 | |||| | || || || |||||||| |||||||||||||| || ||||| ||||| Sbjct 160997 GCCATGCAAAGCAATTAATCCAGATGAAGCTGTTGCTTATGGTGCTGCTGTTCAAGCTGC 161056 Query 196420 TATTCTCTCAGGTGTTG-ACAAT--AATAACGTCCAAGATCTTCTGCTACTTGATGTTGC 196476 | ||| | || || ||||| | ||| || ||||| || | | |||||||| Sbjct 161057 AA---TCTTAAATGGTGAACAATCCTCTGCCGTTCAGGATCTCTTGTTGTTGGATGTTGC 161113 Query 196477 ACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAA 196536 || |||| || ||| | ||||| || |||||||||||||| || ||||||| | || Sbjct 161114 TCCATTATCACTCGGTTTAGAAACTGCTGGTGGTGTTATGACCAAGCTTATTGAGCGTAA 161173 Query 196537 CACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGG 196596 |||||||| || | |||||| ||||||||| | || ||| | ||||| ||| || Sbjct 161174 TACAACTATCCCAGCAAAGAAGACACAAGTCTTCACTACTTATGCTGATAACCAAAGTGG 161233 Query 196597 TGTTCATATTCAAGTATATGAAG--GAGAACGCTCCCGTG-CAAAGGATAACCATCTACT 196653 ||| || ||||| ||||| | |||| ||| || | ||||| ||||| || || Sbjct 161234 TGTCTTAATCCAAGTCTATGAGGGTGAGAGAGCT---ATGACTAAGGACAACCACCTCCT 161290 Query 196654 TGGAACTTTCGAT-TTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATG 196712 |||| ||| || |||| || || ||| | ||||| || ||||| ||||||||| | | Sbjct 161291 CGGAAAATTCCATCTTGA-TGGTATCCCACCAGCACCGAGGGGTGTGCCACAGATTGAGG 161349 Query 196713 TTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAG-GCTTCT 196771 | ||| ||||| || || ||||| || | || ||| | |||| || ||| || | Sbjct 161350 TCACCTTTGATATTGATGCCAATGGTATCTTGAATGTCTCTGCTGTTGATAAGAGCACCG 161409 Query 196772 GGCAAATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATT 196831 | | | | | |||||| ||||| || || ||||| | | || ||||| || ||| Sbjct 161410 GAAAGAGCAG-CAAGATTACCATTACTAACGATAAGGGTAGATTATCAAAGGATGATATT 161468 Query 196832 GAACGTATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAG 196876 ||||| |||||| | ||||| || ||||||| || || || ||| Sbjct 161469 GAACGCATGGTTAATGATGCTGAGAAGTACAAGGGTGAGGATGAG 161513 >seq579 Length=144132 Score = 361 bits (400), Expect = 7e-95 Identities = 1042/1573 (66%), Gaps = 50/1573 (3%) Strand=Plus/Minus Query 195298 AGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCG 195357 || |||||||||||||||||| |||||||| |||||||||||| | | |||||| | | Sbjct 66630 AGTTATTGGTATCGATTTAGGTACTACTTATTCATGTGTTGGTATCTACAAAAATGGTAG 66571 Query 195358 TGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTAC 195417 ||||| || || || ||||| || || ||||||| || ||||| || || | ||||| Sbjct 66570 AGTAGAAATCATTCCAAATGAACAGGGCAACCGTATTACACCATCTTATGTATCATTTAC 66511 Query 195418 AGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAA 195477 ||| |||| | | | || || | || || || || | | || || || | | Sbjct 66510 TGATGATGAGAGATTGATCGGTGAGTCAGCTAAGAACCAAGCTACAATCAATCCAGTTCA 66451 Query 195478 TACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGA 195537 || | || || | ||| | ||||| || || ||| |||| | |||||| | Sbjct 66450 GACATTGTTCGATGTGAAAAGACTTATCGGCCGTCGTTTTAAGGATGACTCCGTCCAAAA 66391 Query 195538 CGATATAAAGGACTGGT---CTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGAT 195594 |||| || | || | ||||| |||| | | | | |||||| || Sbjct 66390 GGATA---AGACTTTGTTACCATATGAGATTGTCAACAAGGA--CAGC-AAGCCTTACAT 66337 Query 195595 TAATGTTGAATTTCACGG-TGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGG 195653 | ||| | | ||| || ||||||||||||||| ||||| ||||| |||| |||||| Sbjct 66336 ACAGGTT-ACTGTCAAGGGTGAGAAGAAACAATTGGCTCCAGAAGAGGTTTCTGCTATGG 66278 Query 195654 TGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAG 195713 | || |||| |||||||||| ||| ||| ||| | || || || || | || | Sbjct 66277 TTTTAGTTAAAATGAAGGAGATTGCTGAAGCTTATCTCGGAAAGGAAGTCAAGCACGCTG 66218 Query 195714 TTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTG 195773 | | ||||| || |||||||| | |||| | || || || || || ||||| |||| || Sbjct 66217 TAATTACTGTTCCAGCTTACTTTAATGATGCTCAGCGTCAAGCCACTAAGGATGCTGGTG 66158 Query 195774 CTATTGCGGGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGCTGCAATTGCT 195832 ||||||| ||| | || ||| | | || || ||||| ||||||||||| || |||||| Sbjct 66157 CTATTGCTGGTTTGAA-TGTAATCCGTATCATTAATGAGCCAACAGCGGCAGCTATTGCT 66099 Query 195833 TATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGT 195892 | |||| |||| ||||| || ||||| | | ||| | | ||| | |||||| Sbjct 66098 TTTGGTTTGGATAAGAAGGCTGA-GAAGAGCA-----TTTTGGTATACGATTTGGGTGGT 66045 Query 195893 GGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACT 195952 ||||| |||||||| || || | | || || ||| | || ||||| || || Sbjct 66044 GGTACTTTTGATGTTTCCCTCTTGACCATCGACAATGGCGTTTTTGAAGTCGTTGCCACA 65985 Query 195953 GCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCA-TTTGTC 196011 ||||||||| ||| |||| ||||||||||||||| | || | || ||| || Sbjct 65984 AGTGGTGATACCCATTTAGGAGGTGAAGATTTCGATCAGAGAGTTATGGACCACTTTATC 65925 Query 196012 -TGATGAGTTCCGTCGAAAGA---ATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTC 196067 ||| | | ||| ||||| ||| | | || |||| || || || |||| Sbjct 65924 AAGATCA-TCAAGTC-AAAGACAGGAAAGGACGTTAAATCTGACAA---AAGAGCCCTTC 65870 Query 196068 GTCGGCTT--AGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAAC 196125 |||| | || | || ||| || | || || |||| || || | | ||| Sbjct 65869 AGAAGCTTCGAAGAGAGGTTGAGAA-GT-CAAAGAGAGCTCTTTCCTCAGCCCCGCAAGT 65812 Query 196126 AATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGC 196185 | |||||||||||| ||| | || | | ||||| |||| | ||| | || Sbjct 65811 TAAGGTTGAGATTGAGGGTTTGATGGAGGACGTAGACTTGAGCGAAACTTTGACCAGAGC 65752 Query 196186 ACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGT 196245 ||||| ||||| || | || ||||| || ||| ||| || || | | || ||| Sbjct 65751 CAAGTTTGATGAGTTGAATGCAGACTTGTTCAGAAAGACTATCGAGCCAG-TCAAGAAGG 65693 Query 196246 ACTTCG-TGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGAT 196304 || | ||||| || | ||||| |||| ||||| || || | || ||||| | Sbjct 65692 TTTTGGAGGACGCTGGAATTAAGAAGTCCGAGGTAGATGAGATCGTTTTGGTCGGAGGTT 65633 Query 196305 CAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAG--CTTCTTCAATAATAAAGATTT 196362 | || ||||| || ||||| || || || || ||||| | || || Sbjct 65632 CCACTCGTATCCCCAAGATCCAGGCCTTG--ATCAAGGAGTTCTTTGACGGAAAGGAGCC 65575 Query 196363 AAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTAT 196422 |||| | |||||||| || ||||| |||||||||||||| || || || |||| || Sbjct 65574 TAACAGAGGAATCAACCCTGACGAAGCCGTTGCTTATGGTGCTGCTGTACAAGCTGGTA- 65516 Query 196423 TCTCTCAGGTGTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGT 196482 ||| || | ||| | || || | | || | | | |||||| |||| | Sbjct 65515 --TCTTAGCAGGTGAGGGTGGTAGCG----ACTTATTAT--TGTTGGATGTTACACCTTT 65464 Query 196483 ATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAAC 196542 | | ||||| |||| || | ||||| |||||||| || | |||| ||| ||||| Sbjct 65463 AACTTTGGGTATTGAGACTGTTGGTGGAGTTATGACCAAGCTCATTGGTAGAAACACTGT 65404 Query 196543 TATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCA 196602 | |||| || |||||| ||||| ||| || || |||||||| |||| || | Sbjct 65403 TGTTCCAACAAAGAAGAGCCAAGTTTTTAGTACTTACCAGGATAATCAGCCAGCCGTACT 65344 Query 196603 TATTCAAGTATATGAAGGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAACTT 196661 ||| ||||| |||||||| || || ||| || | ||||| ||| | || || |||| | Sbjct 65343 TATCCAAGTTTATGAAGGTGAGCG-TCCAATGACCAAGGACAACAACCTCCTCGGAAAGT 65285 Query 196662 TCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCG 196721 |||| | | || || || |||| || ||||||||||| || ||| | ||| || | Sbjct 65284 TCGAGCTTTCTGGAATCCCCCCTGCTCCAAGAGGTGTTCCTCAAATTGAGGTTACTTTTG 65225 Query 196722 ATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTG 196781 | || || | |||| ||| || | |||| || ||||||||| | |||| ||||||| Sbjct 65224 AAATTGATACTGATGGTATTTTACAAGTCAGTGCAAAGGACAAGGGTACTGGTAAATCTG 65165 Query 196782 AAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGG 196841 | || ||| || || ||||| ||||| | ||||| |||| || |||||||||||| Sbjct 65164 AGAAAATTACCATCACAAATGATAAGGGCAGACTTTCACAGGAAGATATTGAACGTATGA 65105 Query 196842 TTCAAGATGCGGA 196854 || | || || || Sbjct 65104 TTAAGGAGGCAGA 65092 >seq849 Length=33325 Score = 163 bits (180), Expect = 4e-35 Identities = 176/233 (76%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| || ||||| ||||| | || ||||| |||||||| | || || ||| Sbjct 19628 GTGGTATGCAGATTTTTGTTAAAACTTTGACAGGAAAGACTATCACATTGGAAGTAGAGC 19569 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | ||||| ||||| || || | ||||| ||||||||||| |||||||| |||||||||| Sbjct 19568 CTTCAGATACAATTGAGAATGTTAAAGCAAAGATTCAAGACAAGGAAGGAATTCCACCCG 19509 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | || ||||| | || || || || || || || || |||||| | || || |||||| Sbjct 19508 ACCAACAACGTTTGATCTTCGCAGGAAAGCAACTAGAGGATGGAAGAACTCTATCTGATT 19449 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 |||| | |||||||| || ||| ||||| | || | ||||| | |||||| Sbjct 19448 ACAATATCCAAAAGGAATCCACTTTACACTTAGTCTTGAGGCTCAGAGGTGGT 19396 Score = 158 bits (174), Expect = 2e-33 Identities = 174/232 (75%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| || ||||| ||||| | || ||||| ||||| || | || || ||| Sbjct 19400 GTGGTATGCAGATTTTTGTTAAAACTTTGACGGGAAAGACTATAACATTGGAAGTAGAGC 19341 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | ||||| |||||||| || | ||||| ||||||||||| |||||||| |||||||||| Sbjct 19340 CTTCAGATACAATCGAGAATGTTAAAGCAAAGATTCAAGACAAGGAAGGAATTCCACCCG 19281 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | || ||||| | || ||||| || ||||| | || || ||| | || ||| |||||| Sbjct 19280 ACCAACAACGTTTGATCTTTGCAGGAAAACAATTAGAGGACGGAAGAACTCTCTCTGATT 19221 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 |||| | ||||| || || ||| |||| | || | || ||| | ||||| Sbjct 19220 ACAATATCCAAAAAGAATCCACTTTACATTTGGTATTGAGACTTAGAGGTGG 19169 Score = 156 bits (172), Expect = 6e-33 Identities = 157/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 171861 TATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTC 171920 |||||| || ||||| || || | || ||||| |||||||| | || || ||| | || Sbjct 19852 TATGCAGATTTTTGTTAAGACTTTGACAGGAAAGACTATCACATTGGAAGTAGAGCCTTC 19793 Query 171921 AGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCA 171980 ||| ||||| || || | ||||| |||||||||||||||||||| |||||||| ||||| Sbjct 19792 AGATACAATTGAGAATGTTAAAGCAAAGATTCAAGATAAGGAAGGAATTCCACCTGATCA 19733 Query 171981 GCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAA 172040 ||||| | || ||||| || ||||| | || || ||| | || ||| |||||||||| Sbjct 19732 ACAACGTTTGATCTTTGCGGGGAAACAATTAGAGGACGGAAGAACTCTCTCTGATTACAA 19673 Query 172041 CGTTCAAAAGGAGTCTACTCTACA 172064 | |||||||| || ||| |||| Sbjct 19672 TATCCAAAAGGAATCCACTTTACA 19649 >seq445 Length=134117 Score = 138 bits (152), Expect = 1e-27 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||| ||||| ||||| | || ||||| || ||||| | || |||||| | || Sbjct 79220 ATGCAAATTTTTGTAAAAACTTTAACAGGAAAGACCATCACATTGGAAGTTGAGCCTTCC 79279 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || | || || ||||| || || || || ||||||||||| ||||| Sbjct 79280 GACACCATTGAGAATGTTAAGGCAAAGATCCAGGACAAAGAGGGCATTCCACCTGATCAA 79339 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || ||||| || || || | |||||||| | || | |||| ||||| Sbjct 79340 CAGCGTCTGATCTTTGCAGGAAAGCAATTGGAAGATGGCAGAACTTTATCTGACTACAAT 79399 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGTG 172090 |||| ||||||||||| |||| | || || || ||| | ||||||| Sbjct 79400 ATTCAGAAGGAGTCTACCTTACATTTGGTGCTGAGACTTAGAGGTGGTG 79448 >seq401 Length=300945 Score = 95.1 bits (104), Expect = 2e-14 Identities = 221/329 (67%), Gaps = 12/329 (4%) Strand=Plus/Plus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 ||||||||||||||||| || ||| | || | || ||| || | || || | ||| Sbjct 205405 AAGATGAAGGAGACTGCTGAGACTTATCTCGGGAGAAGTGTAAAGCACGCTGTAATTACT 205464 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || || || || || | |||||| ||||| || || || |||||||| | |||| || Sbjct 205465 GTGCCAGCCTATTTTAATGATTCTCAACGTCAAGCAACTAAGGACGCGGGCTCTATAGCA 205524 Query 195782 GGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCT 195840 ||| |||| ||| ||||| || || ||||||||||| || || | || || || | Sbjct 205525 GGTTTAAA-TGTGACAAGAATCATTAACGAACCAACAGCAGCAGCTTTGGCATACGGAAT 205583 Query 195841 GGACAAGAACAAGGACGAAGATAAAAATGTATTG--ATCTTTGATCTCGGTGGTGGTACG 195898 || | || | ||| | ||||| |||| | | |||| | || || || || Sbjct 205584 GG------AGAAAGCCGATGGTAAAA--CAATTGCAGTTTATGATTTGGGAGGAGGCACT 205635 Query 195899 TTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGT 195958 |||||| | || || | | || || || |||| || ||||| || || ||| Sbjct 205636 TTTGATATTTCTATTTTAGAGATCCTTGGGGGAGTATTTGAGGTAAAAGCAACAAATGGA 205695 Query 195959 GATACTCATCTAGGTGGTGAAGATTTCGA 195987 ||||| ||||| ||||||||||| || Sbjct 205696 AATACTTCCCTAGGAGGTGAAGATTTTGA 205724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657855385542160