Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20sp._20chipmunk_20LX- 2015_20[genbank_20GCA_5F000831705.1_202015-02-03] 853 sequences; 9,509,783 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq445 87.8 2e-12 >seq445 Length=134117 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTC-GCTCATGGTACGCGAATCTTC 131973 |||||||||| | | ||||| || ||||| |||||||| | | | | | || | ||||| Sbjct 79428 ACCAAATGTAAGGTAGACTCCTTCTGAATATTGTAGTCAGATAAAGTTCTGCCA-TCTTC 79370 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 | || || || | | |||| |||||||||||||| || || ||||| ||||| || Sbjct 79369 CAATTGCTTTCCTGCAAAGATCAGACGCTGTTGATCAGGTGGAATGCCCTCTTTGTCCTG 79310 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 || ||| || | | || | || |||| ||||| ||||| | || | || || Sbjct 79309 GATCTTTGCCTTAACATTCTCAATGGTGTCGGAAGGCTCAACTTCCAATGTGATGGTCTT 79250 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || | |||||||| ||||| ||||| Sbjct 79249 TCCTGTTAAAGTTTTTACAAAAATTTGCAT 79220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476606118133080