Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptosporidium_20sp._20chipmunk_20LX-
2015_20[genbank_20GCA_5F000831705.1_202015-02-03] 853 sequences; 9,509,783 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq849 91.5 1e-13
>seq849
Length=33325
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 10/218 (5%)
Strand=Plus/Minus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
||||| |||||||| |||||| | || || || ||| ||| | || || || |
Sbjct 19395 ATGCAGATTTTTGTTAAAACTTTGACGGGAAAGACTATAACATTGGAAGTAGAGCCTTCA 19336
Query 27850 GACGATGTACAATCG-----GTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904
|| |||||||| || ||| ||| || ||||| ||||| |||| |
Sbjct 19335 GA-----TACAATCGAGAATGTTAAAGCAAAGATTCAAGACAAGGAAGGAATTCCACCCG 19281
Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964
| || ||||| || || ||||| ||||||||||| || |||| | | | | || ||||
Sbjct 19280 ACCAACAACGTTTGATCTTTGCAGGAAAACAATTAGAGGACGGAAGAACTCTCTCTGATT 19221
Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002
|||| ||||||||||| |||||| |||||||| |||
Sbjct 19220 ACAATATCCAAAAAGAATCCACTTTACATTTGGTATTG 19183
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355858700476731
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |