Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20ubiquitum_20[genbank_20GCA_5F001835705.1_202016- 10-24] 27 sequences; 8,965,564 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq1 95.1 1e-14 >seq1 Length=1292604 Score = 95.1 bits (104), Expect = 1e-14 Identities = 169/244 (69%), Gaps = 2/244 (1%) Strand=Plus/Minus Query 57566 AGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGA 57625 ||| |||||| ||||| ||||| |||||||||||||||||| ||||| | || Sbjct 165205 AGATATTTGGTTTATGTATAAAAAAGCAGAAGCATCGTTTTGGGTTACTGAAGAGATTGA 165146 Query 57626 CCTGTCTAAGGATCTGAGCGATTGGGATTCCCTCAAAGAATCTGAGAGAAATTTTATTAA 57685 | | | | ||| || |||||||| || ||||| |||||||| |||||||||| Sbjct 165145 CTTAAGTCAAGATACTAGAGATTGGGAAAGTCTTAAAGACCCTGAGAGACATTTTATTAA 165086 Query 57686 ACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAG 57745 | |||| | || || || || || ||||||||||||| || || |||| | | Sbjct 165085 ATACGTCCTAGCTTTCTTTGCTGCTAGTGATGGTATTGTTATGGAAAACTTGGCTGTCA- 165027 Query 57746 ATTTTC-ACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCA 57804 |||| | | |||| | || | | || || ||| | ||| | ||||||| |||| | Sbjct 165026 ATTTCCTAAGAGAAATACATATCCCAGAAGCAAGAATGTATTATGCATTTCAAATGGCTA 164967 Query 57805 TTGA 57808 |||| Sbjct 164966 TTGA 164963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766249553840