Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20ubiquitum_20[genbank_20GCA_5F001835705.1_202016- 10-24] 27 sequences; 8,965,564 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq13 554 3e-152 seq25 241 1e-57 seq26 143 2e-28 seq7 111 1e-18 seq18 109 4e-18 seq1 104 2e-16 >seq13 Length=315713 Score = 554 bits (614), Expect = 3e-152 Identities = 1017/1474 (69%), Gaps = 46/1474 (3%) Strand=Plus/Plus Query 517265 ACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTC 517324 || || | ||||||||| ||||| | |||||| ||||| |||||||| || || ||||| Sbjct 110579 ACGTTCAAAATACCATTAGCATCAATATCAAAAGTGACCTCAATTTGTGGTACACCTCTT 110638 Query 517325 TGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAAT 517384 | || ||||| || || || | | || |||| ||| | ||||| ||||| | Sbjct 110639 GGTGCTGGTGGAATACCATCAAGGTGGAACTTTCCAAGAAGGTGGTTATCCTTAGTCATG 110698 Query 517385 TTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAG---TTTGATTATCTGAATAAGTT 517441 || |||||| || | | ||| || ||| |||| |||| ||||| | |||||| Sbjct 110699 GCTCTTTCACCTTCATAGACTTGAAT--TAA-TACACCGCTTTGGTTATCGGCATAAGTG 110755 Query 517442 GTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATA 517501 ||||| ||| | ||||| || || |||||||| | ||||||| || |||||| Sbjct 110756 GTAAAGACTTGTGTCTTTTTGGCTGGGATAGTTGTGTTACGCTCAATAAGCTTAGTCATA 110815 Query 517502 ATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTT 517561 | |||||| || ||||| |||||||| || | |||| ||||| | || | | || Sbjct 110816 ACACCACCAGCAGTTTCCAAACCAAGTGATAATGGAGCAACATCTAATAACAAGAGATCC 110875 Query 517562 TGAAGTTTTTCATCAGTTTGACCAACA---AGAATAGCTGCTTGAATAGCAGCACCATAT 517618 |||| || || ||| || || | ||||| ||||| | |||||||||||| Sbjct 110876 TGAACAG---CAGAAGATTGCTCACCATTTAAGATAGCAGCTTGTACAGCAGCACCATAG 110932 Query 517619 GCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATT--TG 517676 |||||||||||||| || |||| | || | | | || ||||| ||| |||| || Sbjct 110933 GCAACAGCTTCATCTGGGTTAATTGCTTTGCATGGCTCCTTTCCATT-AAAGAATTCCTG 110991 Query 517677 AAAGAAGTTGTCTT--ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATG 517734 || ||| ||| ||||| |||||||||| || || ||||| || |||| ||||| Sbjct 110992 AATCAAGG---CTTGGACCTTTGGAATACGAGTAGAACCACCAACCAAAACAACATCATG 111048 Query 517735 CACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGC 517794 || | ||| |||| | |||| | ||||| ||||| || | | | || Sbjct 111049 TACAGATCTTTTGTCCATACCAGCATCCTTGAGTACTTTCTCAACTGGAGCTAAAGTTGC 111108 Query 517795 TCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATT---ATA 517851 | || | || | ||| |||||||| ||| |||||||| ||| || || | ||| Sbjct 111109 ACGGAAGTAATCAGCACAGAGTTCTTCAAATCTAGCTCTACTAA---TGGCAATTGAATA 111165 Query 517852 ATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGC 517911 |||||| ||||| | | ||||| | ||||| |||| |||||| ||||| |||| | Sbjct 111166 ATCAATACCTTCATAAAGTGAATCCAACTCAATAGTAGCTTGAGTTGAAGATGATAAAGT 111225 Query 517912 ACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAA 517971 | || |||||||||||| || |||| ||||| ||| ||| | || | | | || Sbjct 111226 TCTCTTTGCACGTTCACATTGAGTTCTTAATCTTCTTAAAGCTCTGGCATTTGTAGTTAA 111285 Query 517972 ATCTGT---TTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATC 518028 ||| | | ||| |||||||| || |||| || || || |||||| | ||||| Sbjct 111286 ATCCATACCTCTATTCTTTCTCTTAAAGTCTTGTACGCAAAATTCTACAAGTCTGTTATC 111345 Query 518029 AAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATC 518088 |||||||||||| || || | ||||| || | ||||| | || | || | ||||| Sbjct 111346 AAAATCTTCACCACCTAAGTGAGTATCACCAGCAGTAGCCTTAACCTCAAAGATACCATC 111405 Query 518089 TTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATT 518148 |||| || || | | ||||||| || |||||||||| ||| || || | ||||| Sbjct 111406 CTCAATAGTTAATAATGATACATCAAATGTACCACCACCCAAATCGAAGATCAAAACATT 111465 Query 518149 CATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATT 518208 | || | || |||||||||||||| |||| ||| || || |||||||| || Sbjct 111466 TCTCTCACCAGTTCCCTTCTTATCAAGACCATAAGCAATAGCTGCGGCTGTTGGTTCGTT 111525 Query 518209 AATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTG 518268 ||||||||||| ||||| | |||||||||| |||||||| ||||| ||||| | ||| Sbjct 111526 AATAATTCTCATTACATTTAAACCAGCAATTGCACCTGCATCCTTAGTTGCTTGACGTTG 111585 Query 518269 TGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTT---CTTTACCAAT 518325 || || || ||||| || || ||||||| ||||||| ||| || | | | | | Sbjct 111586 AGAGTCATTGAAATAAGCTGGTACAGTAACTACGGCAT-TCTTAATTGGGCGTCCCAAGT 111644 Query 518326 ATAAGCGCTT--GCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTG-- 518381 || |||| | | | ||||| || ||||| ||| | ||||||| ||| | Sbjct 111645 AT----GCTTCAGAAATCTCCTTCATCTTTTGTAAAACCATAGCAGAAATTTCTTCAGCA 111700 Query 518382 GGGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTT---ATTACCAA 518438 ||| ||| ||| ||| | ||| ||| || | |||||| || Sbjct 111701 TGGA--ATTCCTTCTTCTCACCTAAATAACTTACACTAATAATTGGTTTGTCTTTTGGGC 111758 Query 518439 CATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAAT 518498 | ||| | |||||||||||||| ||||||| ||| || ||||| | ||| | Sbjct 111759 CTCTAACTATTTTAAATGGCCAGTGAGTCATATCACTTTGCACTGCCTGGTCGTCAAATT 111818 Query 518499 CTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGAT 518558 ||||||||| | ||||| |||||||| | ||||| |||||| | ||| |||| | Sbjct 111819 TTCTACCAATAAGACGTTTAGCATCAAAGACTGTATTATCTGGATTTCTAGCAACTTGGT 111878 Query 518559 ATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTG 518618 || |||||||||||||| ||| | || ||||||||||||| ||||||||||| |||| Sbjct 111879 TCTTTGCTGCATCTCCAATGAGACGCTCAGTCTCTGTAAATGCTACATATGATGGTGTTG 111938 Query 518619 TGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACAC 518678 | || |||||||||||||| | || ||| || ||| || ||||| ||||||||| |||| Sbjct 111939 TACGGTTACCTTGATCATTTGGAACAATATCTACTGTATCATTTCTCCATACACCAACAC 111998 Query 518679 AACTAAAAGTTGTTCCTAAATCAATACCAATAGC 518712 | | || || |||||||||||||||||||| Sbjct 111999 ACGAGTATGTGGTACCTAAATCAATACCAATAGC 112032 Score = 102 bits (112), Expect = 6e-16 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 322243 ACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGC 322302 ||| || |||| |||||| || |||||||| ||||| ||| | | |||| |||||| || Sbjct 111493 ACCATAAGCAATAGCTGCGGCTGTTGGTTCGTTAATAATTCTCATTACATTTAAACCAGC 111552 Query 322303 AATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGT 322362 |||| | | | ||| ||||||||| | || | |||||| ||||| ||||||||||| Sbjct 111553 AATTGCACCTGCATCCTTAGTTGCTTGACGTTGAGAGTCATTGAAATAAGCTGGTACAGT 111612 Query 322363 AATAACTGCTTTATTAATAGG 322383 || || || || ||||| || Sbjct 111613 AACTACGGCATTCTTAATTGG 111633 >seq25 Length=676938 Score = 241 bits (266), Expect = 1e-57 Identities = 1010/1574 (64%), Gaps = 33/1574 (2%) Strand=Plus/Minus Query 517146 CTTCTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTC 517205 |||| |||||| | |||||| ||||||| | |||||| | |||| ||| | ||| | Sbjct 84479 CTTCGGCAAATTGCTCAGCTTCCTTAATCATGCGCTCAATGTCCTCTTGAGAAAGTCTAC 84420 Query 517206 CGCGATTATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCA 517265 | || ||| || |||||||| |||| ||||| || |||||| ||| | | Sbjct 84419 CCTTATCATTTGTGATAGTAATCTTCTCAGATTTACCAGTACCTTTATCTTTTGCACTGA 84360 Query 517266 CATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCT 517325 | | | |||||| | | ||| | ||||| || || ||||| ||||| || ||||| Sbjct 84359 CTTGTAAAATACCGTCAGTATCAATTTCAAAGGTAACCTCAATCTGAGGAACACCTCTTG 84300 Query 517326 GAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATT 517385 |||| || || || || | | ||| |||| || || || || || || | | Sbjct 84299 GAGCTGGAGGAATTCCAGAAAGCTCAAACTTTCCGAGTAGGTTGTTGTCCTTGGTCATTG 84240 Query 517386 TTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAA 517445 ||||||||||| ||| || ||| || | | ||| ||||| ||||| | | Sbjct 84239 GACGTTCACCCTCATAAACCTGAATAAGTACGGCTGGTTGGTTATCCTGGTAAGTACTGA 84180 Query 517446 ATACTCTGGAT-TTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATA 517504 | || |||| | ||||| |||| |||||||||| |||| | |||||||||| Sbjct 84179 AAAC-CTGGCTCTTTTTGGTTGGAACAACTGTGTTTCTACCAATGAGCTTGGTCATAACT 84121 Query 517505 CCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGA 517564 ||||| | || || | ||| | || | |||||| ||||| | || ||| | | Sbjct 84120 CCACCAACAGTCTCAATACCCAAAGTCAAAGGAGTAACATCCAATA-----ATAGT---A 84069 Query 517565 AGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACA 517624 | | | | || | || | | ||| | ||||| | |||||||||||| ||||| Sbjct 84068 AATCACT-ACCACCCTCGCCTGCTAATATACCGGCTTGTACAGCAGCACCATAGGCAACG 84010 Query 517625 GCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATT-TGAAAGAAG 517683 |||||||| || || | | ||| | | || || | || || | | || ||| Sbjct 84009 GCTTCATCTGGGTTGATTCCTCTGTTTGGCTCCTTCCCGTCAAAGAACTCCTTAATCAAG 83950 Query 517684 TTGTCTT-ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTG 517742 | || | ||| |||||||||| || || || || || || ||||||| |||| | Sbjct 83949 --GCCTGGATCTTGGGAATACGAGTCGAACCACCGACCAAAACGATTTCATCTACCTCAG 83892 Query 517743 ATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACA 517802 | || | | | | || |||||||| | ||| || |||| | |||||| | Sbjct 83891 ACTTCTTAATTCCAGCGTCTTCCAAAACTTTCTTAACTGGCTCAATAGTTTTTCTAAATA 83832 Query 517803 AGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTT 517862 |||| | || ||||| || |||||||| ||||| | | |||| | | | Sbjct 83831 GATCTGCGTTCAACTCATCGAACTTGGCTCTAGTCAGAGTCTCGCTCAAATCTACATCCT 83772 Query 517863 CGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCAC 517922 | | |||| |||| ||| | | || ||| | | ||||| || || | |||| Sbjct 83771 CCATCAAACCTTCAATTTCTACCTTAACTTGTGGAGCTGAAGAAAGGGCTCTCTTAGACT 83712 Query 517923 GTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAA-ATCTGTTTTA 517981 |||| || | || || || | | |||| | || || | || ||| ||| Sbjct 83711 TTTCAACCTCTCTTCTAAGCTTTTGAAGGGCTCTCT-TGTCAGACTTAACATCC-TTTCC 83654 Query 517982 TAT-TTTCTCTTGAA-ATCTTCAACACACCATGTTACAAGACGATTA--TCAAAATCTTC 518037 | | ||| ||| | ||||| | | | || | || || | || ||||| || Sbjct 83653 TGTCTTTGACTTAATGATCTTGATGAAA---TGGTCCATAACTCTCTGGTCGAAATCCTC 83597 Query 518038 ACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGA 518097 |||||| || | |||| || || || |||| || | |||| |||| | Sbjct 83596 ACCTCCTAAATGGGTATCACCACTTGTGGCAACGACTTCAAATACCCCATTATCAATGGT 83537 Query 518098 CAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTT 518157 ||| || | |||||| || |||||||||| |||| | | | | || | |||| Sbjct 83536 CAAGAGTGAAACATCAAAAGTACCACCACCCAAATCATACACCA--AGATGCTCTTCTCA 83479 Query 518158 GTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCT 518217 | ||| ||||| | |||| | |||| ||| || || |||||||| |||||||| | Sbjct 83478 GCCTTC----TTATCTAAACCAAAAGCAATAGCTGCTGCTGTTGGTTCGTTAATAATACG 83423 Query 518218 CAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTT 518277 | ||||| | ||||||||| || || || ||||||||||| | ||| | ||| || Sbjct 83422 AATTACATTCAAACCAGCAATGGCACCAGCGTCCTTAGTGGCTTGACGTTGAGCATCATT 83363 Query 518278 AAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGC 518337 ||| || || || |||||||| || || | |||| || || || | |||||| || Sbjct 83362 AAAGTAAGCTGGTACAGTAATTACTGCGTGTTTTACCTCCTTTCCGAGATAAGCTTCAGC 83303 Query 518338 CGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGA 518397 | | |||||| ||| || | ||| | |||| || ||||| | | ||||| Sbjct 83302 AATCTCTTTCATCTTAAGCAAGACCATAGCAGAAACTTCCTCTGGAGCTAACTGCTTCTT 83243 Query 518398 TTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGG 518457 || || | || || | || || || ||| | | |||||||| || | |||| Sbjct 83242 CTCGCCTTTAACTGTAACCTGAATGTAAGGCTTACTTTCTTTATTAATAATTTCATATGG 83183 Query 518458 CCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTT 518517 | || || |||| ||| || | || || ||| | ||||| | || || Sbjct 83182 TAACAATGTCTTATCCTTTTGGACGGAATCATCCTTGAAACGACGGCCAATAAGTCTCTT 83123 Query 518518 TGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAAT 518577 | ||||||| | || | ||||| |||| ||| || | ||| |||| || || || Sbjct 83122 TACATCAAACAAGGTCTGAACCGGATTGATTGTAGCCTGGTTTTTAGCTGACTCACCGAT 83063 Query 518578 CAGATGTTCTGTC-TCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCAT 518636 | || || || || |||||||| ||||| ||||| || | || |||||||| |||| Sbjct 83062 TA-ATCTTTCATCATCAGTAAATGATACATAAGATGGTGTAATACGGTTACCTTGTTCAT 83004 Query 518637 TCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTA 518696 | | ||||||||| ||| ||||||| | | | ||| ||||| | |||| || |||| Sbjct 83003 TTGGAATAATTTCTACTCTACCATTCTTGTAAATACCAACACATGAATAAGTAGTACCTA 82944 Query 518697 AATCAATACCAATA 518710 |||||||||||||| Sbjct 82943 AATCAATACCAATA 82930 Score = 98.7 bits (108), Expect = 8e-15 Identities = 196/290 (68%), Gaps = 19/290 (7%) Strand=Plus/Minus Query 322084 GTCAAAATCTTCTCCTCCCAAATGTGTATTACCACCTACTGCTAATG--TTCTAAATACT 322141 ||| ||||| || ||||| ||||| |||| ||||| | || || | ||| |||||| Sbjct 83608 GTCGAAATCCTCACCTCCTAAATGGGTATCACCACTTGTGGC-AACGACTTC-AAATACC 83551 Query 322142 CCATTTGAGATATTCATTAACGAAACATCTAAAGTCCCAGCTCCTAAGTCATAAACAATT 322201 ||||| || ||| | |||||||| ||||| ||| | || || ||||| || | Sbjct 83550 CCATTATCAATGGTCAAGAGTGAAACATCAAAAGTACCACCACCCAAATCATACACCAAG 83491 Query 322202 ACGTTACCACCAGtttttttATTCCATTTTTCACTTCCTAAACCGTATGCAAGAGCTGCT 322261 | | | ||| || |||| ||||||| | |||| ||||||| Sbjct 83490 ATGCTCTTCTCAGCCTTCTTAT---------------CTAAACCAAAAGCAATAGCTGCT 83446 Query 322262 GCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCAATTTTAGCAGAATCAAGA 322321 || |||||||| ||||| || || |||| ||||| ||||| | ||| || | Sbjct 83445 GCTGTTGGTTCGTTAATAATACGAATTACATTCAAACCAGCAATGGCACCAGCGTCCTTA 83386 Query 322322 GTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTAATAACTGC 322371 || ||||| | || || |||||||| || |||||||||||||| ||||| Sbjct 83385 GTGGCTTGACGTTGAGCATCATTAAAGTAAGCTGGTACAGTAATTACTGC 83336 >seq26 Length=437080 Score = 143 bits (158), Expect = 2e-28 Identities = 327/485 (67%), Gaps = 28/485 (6%) Strand=Plus/Plus Query 303735 AAGTCCACCATCTCTTGATCTACCTTCTGGCGCTTGTCTTGTAAGTAACTGTGTT---GG 303791 ||||||||| ||||||| || |||||| | |||||| || |||| |||| | Sbjct 149912 AAGTCCACCTTCTCTTGCCCTTCCTTCTCTTGGTTGTCTCGT---TAACATTGTTACAGC 149968 Query 303792 TCCACGAGCGCGTGAGTGGGCCTTGTCGCCTACCATTTGTTTCAATCTCTGATAATATGT 303851 ||| | ||| | | || ||||| | ||||| ||||| |||||||||||||| || Sbjct 149969 TCCTCTAGCTCTAGCATGAATTTTGTCATCAACCATATGTTTTAATCTCTGATAATAAGT 150028 Query 303852 CGGACCAATAAAAATTTTA-ACTGGTAATTTTTTACCATTCATTCCATTATACATAGTTT 303910 || |||||||| ||| | ||| |||| | || || | ||||| ||||| || Sbjct 150029 TGGTCCAATAAATATTCTCGACTC-TAATCTCTTTCCCGTGTGGCCATTGTACATTACTT 150087 Query 303911 CATTACCCCATTCTTCATAACCAGCAGCAACTAATTCATCG-TTA---ATGGCATTAAGA 303966 |||| || || || | | |||| ||||| | || ||| || | | || Sbjct 150088 CATTTCCATTTTTTTGAAATCCAG----AACTATGCAAACGGTTAGATATCTCTTCAACT 150143 Query 303967 TCAACACTTGTAAATGGTGTTGCATCGCCATACACTCCTTTAACTGCACATAGTTTTCCT 304026 || ||||||| || || ||||| || | || ||||| || ||||||| ||| || Sbjct 150144 GTAATTTTTGTAAAAGGAGTCGCATCACCTTCCAATCCTTGAATTGCACATGCTTTACCA 150203 Query 304027 AATAAACATTCAATAAGTTGCCCAATAGTCATACGTTTGGGCATACAATTAGGATTGATA 304086 | | ||||||||| | || ||||| ||||||||| || ||| || |||||| ||| Sbjct 150204 AGAAGACATTCAATTAAATGGCCAATCGTCATACGTGAAGGAATAGCATGAGGATTCATA 150263 Query 304087 ATAATATCGGGAATTAATCCAGATTTACTGAATAACATATCTGCTCGATGAGCTTTGTAT 304146 |||||||| ||||| | ||| || | | || |||||| ||| || | ||||| Sbjct 150264 ATAATATCCGGAATAATCCCATCTTGAGTAAAAGGCATATC--CTC----AGTTCTGTAT 150317 Query 304147 ------CCAATGGTACCTTTTTGACCTGCTCTTGACGAAAATTTATCACCTACATTGGGA 304200 ||||| ||||| ||||| || ||| || | ||||||||| || || | || Sbjct 150318 GTTATACCAATTGTACCCTTTTGGCCATGTCTAGATGCAAATTTATCTCCGACGTGAGGT 150377 Query 304201 ATTCT 304205 ||||| Sbjct 150378 ATTCT 150382 >seq7 Length=503753 Score = 111 bits (122), Expect = 1e-18 Identities = 329/494 (67%), Gaps = 29/494 (6%) Strand=Plus/Plus Query 517155 ATTCTTTAGCTTCTCTAATCATTCTCTCAATTT--GATCTTCAGAGAATCTTCCGCGATT 517212 |||||| ||| ||||||| |||||| ||||||| || || | || | || || Sbjct 271641 ATTCTTCAGCCTCTCTAACCATTCTTTCAATTTCAGAACTGCTAAGG--CCACCA-GAAG 271697 Query 517213 ATTAGTAATAGTAATATTCTTGGATTTGTTT---GTTGATTTATCAGCGGCAGTCACATT 517269 ||| | || || || ||| || ||| ||| ||||| || ||| ||| ||||| Sbjct 271698 ATTGG--ATGGTGAT-TTCATG--TTTCTTTCCGGTTGACTTGTCAATCGCACCGACATT 271752 Query 517270 AAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGC 517329 | || ||||| ||||| | |||||| || |||||||||||||| || ||||| |||| Sbjct 271753 CATGATTCCATTTGCATCTATATCAAAAGTAACTTCAATTTGAGGAACTCCTCTTGGAGC 271812 Query 517330 AGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCG 517389 || || || || || | ||| ||| || ||||| || || || | || Sbjct 271813 TGGAGGAATTCCCATCATCTCAAACTGTCCAAGTAACTTATTGTCAGCAGCAAACTCTCT 271872 Query 517390 TTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATAC 517449 ||| || | ||||| || ||| |||| ||||||||| |||| | ||| | ||| || Sbjct 271873 TTCTCCTTGGAAAACTTTGATTCCAACTTGAGTTTGATTGTCTGCAGCAGTAGAAAAGAC 271932 Query 517450 TCTGGAT-TTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTG-GTCATAATACCA 517507 | || | || || ||| ||||| || ||||||| || | || | || | || ||| Sbjct 271933 T-TGACTCTTCTTGGTAGGGATTGTAGTATTTCTATTGATTA-ATCGAGTAAAAACTCCA 271990 Query 517508 CCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGT 517567 || ||||| | ||| | ||| | |||||| ||||||| | |||| || || Sbjct 271991 CCCAAAGTTTCAATACCTAAAGATAAAGGAGTAACATCAAGCA--ACAA------GAGGT 272042 Query 517568 TTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCT 517627 ||| | ||| || | || |||| || || ||||| || |||||| ||| Sbjct 272043 CTTT----AATTTCTCCTTTTAAAACTCCTGCCTGGATTGCAGCTCCCATTGCAACGGCT 272098 Query 517628 TCATCAGGATTAAC 517641 |||||||| ||||| Sbjct 272099 TCATCAGGGTTAAC 272112 >seq18 Length=776017 Score = 109 bits (120), Expect = 4e-18 Identities = 127/170 (75%), Gaps = 1/170 (1%) Strand=Plus/Minus Query 870806 GATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTAAGATCAACTATT 870865 |||| ||| || ||||||||||| |||||||||||| | || ||||| ||||| || || Sbjct 453497 GATTTTTCATCACCAAATATTGCAAAAGAAATGCATGTAGGGCATTTGAGATCTACAATC 453438 Query 870866 ATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGGACACGATGTTTATCGTATTAAT 870925 |||||||| | || | |||| | || ||| | | | || |||| | |||||| Sbjct 453437 ATTGGTGATACAATATCTAGGATTTTGGAATACTTGGAATTTGAGGTTTTAAGAATTAAT 453378 Query 870926 CATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATTGCTTATATTAA 870975 ||||| || |||||||| |||||||| || ||| | |||| ||| |||| Sbjct 453377 CATGTTGGAGATTGGGGTACTCAATTTGGGATGCTTATTGAATAT-TTAA 453329 >seq1 Length=1292604 Score = 104 bits (114), Expect = 2e-16 Identities = 299/444 (67%), Gaps = 16/444 (4%) Strand=Plus/Plus Query 396953 TCGAATGGATTATCAACATTG-AATTTTTTGCGATAACCAAGATCTACAAGTAATCTGTC 397011 ||||| |||||| ||||||| || |||| | |||| ||| || | | ||| | ||| || Sbjct 164429 TCGAAGGGATTAGAAACATTGTAAATTTTGGGGATATCCA-GAGCAAAAAGGAGTCTATC 164487 Query 397012 AGCAACATATTTAATATATTGAGACATTAGTTCAGAATTCATACCAAGAAGTTTACACGG 397071 ||| ||| ||| ||||||||||| ||| ||| ||| ||||| |||| ||| | | || Sbjct 164488 AGCTACAAATTCAATATATTGAGCCATAAGTCTAGAGTTCATTCCAATAAGATCAACAGG 164547 Query 397072 AAGAGAATCATTAATAAATTCTTCTTCAATTTCAATCGCTTCGTCAATAATTTGGTAAAC 397131 ||| || ||| || ||| | | ||| | |||| ||||| |||||||| | || Sbjct 164548 AAGTGAGTCACAAAGAAAGTTTCTTTCTACATCAACAGCTTCTGAGATAATTTGTTGTAC 164607 Query 397132 AACAGATTCTTTCAAACGATTATTCAACA-ATGAATACATAATACAAGCAAGTTCTACAT 397190 ||| || | |||| || | | || || | ||||||| || ||| Sbjct 164608 TCTAGA-AGTTGGTAGTTTATATTTAAGAGCTTTGTATATTAAGCAAGCAAAGTCAGCAT 164666 Query 397191 GTTTGTTTTCATCACGAGCAATAAATTGATTTGATATAATTAGACCAGGCATTACATGCA 397250 || ||||||||| ||||| || ||| || | | || ||||||| || | || Sbjct 164667 GTAATCCTTCATCACGGCTAATAAGTTCATTAGAGAATGTAAGTCCAGGCA-TAAGTCCA 164725 Query 397251 TTTCTCTAGTTTTTAACCAGAAAATCGAAGCAAATGAT-CCACTAAAGAAAACGCCTTCT 397309 | || |||| | ||| || || | | |||| | | ||| ||| | || |||||| Sbjct 164726 ---CGCT--TTTTAAGCCAAAATATAGCA-CAAAAGCTACCAGAAAAAAGAATTCCTTCT 164779 Query 397310 ACAATAGAGAATGCTACTAATT-TGTGAGCATAAG-TCTTATCAGATTTAATCCATTTAT 397367 ||| | ||||| | | ||||| | | |||| ||| |||| ||| || ||||||||| Sbjct 164780 ACAGCACAGAAT-CCAATAATTCTCTCAGCAAAAGATCTT-TCATTATTCATCCATTTAG 164837 Query 397368 TACACCAATCAGCTTTCTTTTTAA 397391 | ||| || ||||||||||||| Sbjct 164838 TTGCCCATTCTGCTTTCTTTTTAA 164861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780821060171062