Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20ubiquitum_20[genbank_20GCA_5F001835705.1_202016- 10-24] 27 sequences; 8,965,564 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq13 381 7e-101 seq1 201 1e-46 seq25 163 4e-35 seq4 113 6e-20 >seq13 Length=315713 Score = 381 bits (422), Expect = 7e-101 Identities = 1059/1602 (66%), Gaps = 34/1602 (2%) Strand=Plus/Plus Query 6568 TTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGA 6627 |||||| ||| | || || || || ||||| | ||||| ||| || || || || || Sbjct 110452 TTCATCCTCACCCTTGTATTTCTCAGCATCATTAACCATACGTTCGATATCATCCTTTGA 110511 Query 6628 TAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTC 6687 |||||| |||||||| || ||||| || ||||| |||||| | |||||| | Sbjct 110512 TAATCTACCCTTATCGTTAGTAATTGTGATCTTGCTACTTTTACCGGTACTCTTATCGAC 110571 Query 6688 AGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGT 6747 ||| ||| |||||||||||||| ||||||| ||| || | || | |||||||||| Sbjct 110572 AGCGGATACGTTCAAAATACCATTAGCATCAATATCAAAAGTGACCTCAATTTGTGGTAC 110631 Query 6748 ACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGT 6807 ||| || ||||| | ||||||||| | | || | ||||| | ||||||| | Sbjct 110632 ACCTCTTGGTGCTGGTGGAATACCATCAAGGTGGAACTTTCCAAGAAGGTGGTTATCCTT 110691 Query 6808 CGCCTTCTTACGTTCACCTTCATAGACTTTAATT--GTCACCGCAGGTTGATTATCTTGT 6865 | | | | ||||||||||||||||| |||| |||||| ||| ||||| Sbjct 110692 AGTCATGGCTCTTTCACCTTCATAGACTTGAATTAATACACCGC--TTTGGTTATCGGCA 110749 Query 6866 GCCGTTGAGAAGATTTGT-TCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGG 6924 || | |||| |||| ||||| || | ||| || || || || | | ||||| | Sbjct 110750 TAAGTGGTAAAGACTTGTGTCTTT-TTGGCTGGGATAGTTGTGTTACGCTCAATAAGCTT 110808 Query 6925 GGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAA 6984 ||||||| |||||| |||||| | ||||| || | || | || || || | || Sbjct 110809 AGTCATAACACCACCAGCAGTTTCCAAACCAAGTGATAATGGAGCAACATCTAATAACAA 110868 Query 6985 CAGGTCTTGAACAG-ATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCC 7043 || || ||||||| | | | | ||||| ||||||| || ||||| || | || | Sbjct 110869 GAGATCCTGAACAGCAGAAGATTGC-TCACCATTTAAGATAGCAGCTTGTACAGCAGCAC 110927 Query 7044 CGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAAT 7103 | || || || || ||||| |||||||| | ||| | || || || ||||| | | Sbjct 110928 CATAGGCAACAGCTTCATCTGGGTTAATTGCTTTGCATGGCTCCTTTCCATTAAAGAATT 110987 Query 7104 CCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCAT 7163 || | || ||| | || || || || || || ||||| |||||||| | |||| Sbjct 110988 CCTGAATCAAGGCTTGGACCTTTGGAATACGAGTAGAACCACCAACCAAAACAACATCAT 111047 Query 7164 TCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATT 7223 || ||| || || | || ||| ||| || || || | | | | Sbjct 111048 GTACAGATCTTTTGTCCATACCAGCATCCTTGAGTACTTTCTCAACTGGAGCTAAAGTTG 111107 Query 7224 TACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAAT 7283 |||||| | || ||| ||||| ||||| | || | |||||| | | ||| Sbjct 111108 CACGGAAGTAATCAGCACAGAGTTCTTCAAATCTAGCTCTACTAATGGCAATTGAATAAT 111167 Query 7284 CAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTC 7343 ||| || || || | ||||| | ||||| || | ||| | | || ||||| |||| Sbjct 111168 CAATACCTTCATAAAGTGAATCCAACTCAATAGTAGCTTGAGTTGAAGATGATAAAGTTC 111227 Query 7344 GCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGG--AAAT 7401 |||||| || ||||| |||| ||| | | | || | | || | |||| Sbjct 111228 TCTTTGCACGTTCACATTGAGTTCTTAATCTTCTTAAAGCTCTGGCATTTGTAGTTAAAT 111287 Query 7402 ATCTTTCT-TATGTTTACGTTTAAACTCTT---CAGAGAAGTGTCGAAGGAGTCTCGAAT 7457 | || ||| || | ||||| |||| | | || | | | ||||| || Sbjct 111288 CCATACCTCTATTCTTTCTCTTAAAGTCTTGTACGCAAAATTCT---ACAAGTCTGTTAT 111344 Query 7458 CGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTC 7517 | |||||||||||||| ||||| ||||| || || || || || || ||||||||||| Sbjct 111345 CAAAATCTTCACCACCTAAGTGAGTATCACCAGCAGTAGCCTTAACCTCAAAGATACCAT 111404 Query 7518 CTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGT 7577 | ||||| |||| || || |||||||| ||||||||||||| || || || | || | Sbjct 111405 CCTCAATAGTTAATAATGATACATCAAATGTACCACCACCCAAATCGAAGATCAAAACAT 111464 Query 7578 TCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCAT 7637 | | || | | |||||||| ||||| || || ||||| || || |||||||| | Sbjct 111465 TTCTCTCACCAGTTCCCTTCTTATCAAGACCATAAGCAATAGCTGCGGCTGTTGGTTCGT 111524 Query 7638 TAATAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 ||||||| | | ||| || | |||||||| | | ||||| || || ||||| ||| Sbjct 111525 TAATAATTCTCATTACA-TTTAAACCAGCAATTGCACCTGCATCCTTAGTTGCTTGACGT 111583 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACT-TTCTTACCGAG 7755 || || || || || || || || || || || || || | | | | | | | || || Sbjct 111584 TGAGAGTCATTGAAATAAGCTGGTACAGTAACTACGGCATTCTTAATTGGGCGTCCCAAG 111643 Query 7756 ATACGATTCCGCGATATCTTTCAT-TTTGGTAAGAACCATCGATGAAATCTCTTCAGCCG 7814 || | ||| | || || ||||| ||| |||| |||||| | ||||| |||||||| Sbjct 111644 -TATGCTTCAGAAATCTCCTTCATCTTTTGTAA-AACCATAGCAGAAATTTCTTCAGCAT 111701 Query 7815 CAAACTGTTTCGTTTCACCGTTAAAATCAACTT----CAATCATGGGTTTATCCGCAGCA 7870 || | ||| | ||||| |||| ||||| ||| || ||||| || | Sbjct 111702 GGAATTCCTTCTTCTCACC--TAAA--TAACTTACACTAATAATTGGTTTGTCTTTTGGG 111757 Query 7871 CCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAAC 7930 || | | ||| | | ||| | ||||||| ||| || ||||| ||| Sbjct 111758 CCTCTAACTATTTTAAATGGCCAGTGAGTCATATCACTTTGCACTGCCTGGTCGTCAAAT 111817 Query 7931 TTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGG 7990 ||||| || |||||||| || |||||||| ||||| || | || || | || |||| Sbjct 111818 TTTCTACCAATAAGACGTTTAGCATCAAAGACTGTATTATCTGGATTTCTAGCAACTTGG 111877 Query 7991 TTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGG 8050 ||||| || || || || || ||||| || | | || ||||| || || || ||||| Sbjct 111878 TTCTTTGCTGCATCTCCAATGAGACGCTC---AGTCTCTGTAAATGCTACATATGATGGT 111934 Query 8051 GTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCG 8110 || || || || ||||| || || | || ||| ||||| || ||| ||| || || Sbjct 111935 GTTGTACGGTTACCTTGATCATTTGGAACAATATCTACTGTATCATTTCTCCATACACCA 111994 Query 8111 ACGCACGAATACGTTGTTCCTAAATCAATACCGATTGCTTGA 8152 || ||||| || || || |||||||||||||| || ||| || Sbjct 111995 ACACACGAGTATGTGGTACCTAAATCAATACCAATAGCTGGA 112036 >seq1 Length=1292604 Score = 201 bits (222), Expect = 1e-46 Identities = 1185/1864 (64%), Gaps = 55/1864 (3%) Strand=Plus/Minus Query 104332 AACTGAATAGGTCGTGATTTCGCTTT-ACTTCGAAGGTAATACATACCCGTTTTTAAACC 104390 || || || || |||| || |||||| | ||| || ||||| || || |||||||| || Sbjct 444097 AATTGTATTGGACGTG-TTGCGCTTTGAGTTCTTAGATAATAAATGCCAGTTTTTAATCC 444039 Query 104391 AGTTTTCCACGCGTACATGTGCATAGACGAAAGTTTTGAAATTGTTGGACTCTCGAC--G 104448 ||||||| | || | ||||| || || | |||| || | | | | || | | Sbjct 444038 TTTTTTCCAGCCATAGAAATGCATCGATGATAACTTTGCAAAGTTAGCATTTTCCATATG 443979 Query 104449 AATAAGTTCATACTTTGACTTTGGTCTATATACACACCTCTATCCGCCGCCATATCGATG 104508 |||| | | ||| |||| || ||||| || ||||| || ||||||||||| Sbjct 443978 AATATTTAAAGACTGAGACT--GGCAAATATATGGGCCCCTATCTGCAGCCATATCGATT 443921 Query 104509 ATTGTTTTTTGACTCATTTCCCATACGGTTTTATACAATTCCTTAAGATCATCGGGTATA 104568 | ||| ||||| | || ||||| || |||||||| | ||| | || || || || Sbjct 443920 ACTGTCTTTTGCTTAATCTCCCAAACTGTTTTATAAAGTTCGCGGACGTCCTCCGGGATT 443861 Query 104569 TCAATAATGTTTTGAACAGACCCATTTGCCTTCACCATAAGATCTTTCATTT---CCT-T 104624 || ||| ||||||| | ||||| || | || ||| ||| ||| ||| | Sbjct 443860 GTAAGAATATTTTGAATACTTCCATT---ATTTGCAAT--GATATTTTGTTTAAGCCTGT 443806 Query 104625 C-GACCAGAGTCCACGTTCTTTCAAATCGTTTACTAAATGTTTGTTTACGACGACAAATT 104683 | ||| || ||| |||| ||| || || | |||||| || || || | ||||| Sbjct 443805 CATCCCATAGCCCAAGTTCAAGCAAGTCATTGAGTAAATGAGGATTCACTACAAAAAATT 443746 Query 104684 CACCCGCGAGTGTTCGTCTCAAATAGATATTGGTCGTATACGGTTCGAAACACTCGTTGT 104743 |||| | ||| | | ||| ||||| | ||| | ||||| |||| ||||||| Sbjct 443745 CACCAGAAAGTACCCTACGATGATATATATTTGAAGTAAATGGTTCAAAACTTTCGTTGT 443686 Query 104744 TCCCTAAAATCTGGGATGTGGATGCGGTAGGCATAGGTGCAAGAAGAAGACTATT-CATA 104802 | ||||| || || || || || || |||||||| || |||| ||||| ||| | | Sbjct 443685 TACCTAATATTTGCGAGGTAGACGCAGTAGGCATTGGAGCAATTAGAAGTGAATTACGGA 443626 Query 104803 GTTCCTTTCTTAACAA--GTTTACGCATG-GCATTCCAATCGTATCGACCACTAAACTTT 104859 | || | |||| || ||| | | | || ||| ||| | | || | | | Sbjct 443625 G-CCCATACTTAGAAATCCTTTCTTTAAGTGAATCCCAGTCGCAAAGCCC---AGAATCA 443570 Query 104860 GGGT---CTCGATCCCACATATCGAATTGAAGAATACCTTTACTAAACGGTGACCCCTTA 104916 || | ||| ||||||| || ||||| |||||||||||||| |||||||| | Sbjct 443569 GGCTTAACTC---CCCACATGTCAAATTGTAGAATACCTTTACTCGCGGGTGACCCAGAA 443513 Query 104917 AACGTTTCATAAGGACCGTACATTTCGGCAAGTTCACACGACGATTCGAGTGATGCGTGG 104976 |||||||||| || || | |||| || || || || | ||||| | || | Sbjct 443512 TACGTTTCATACGGCCCATCTTTTTCTGCGAGCTCGCAACTAGCCTCGAGCGCCGCATAA 443453 Query 104977 TAGATAGTTTCGAATATATCAATGTTGAGTTTTCTCGATTCTTCTGAACCGAATGTCATT 105036 || ||| ||| || || || | || | ||| || | | ||||| | ||| ||| Sbjct 443452 TAAATAACTTCAAAAATCTCCTTATTTAATTTCCTAGCCTTCTCTGATTCATATGGCATA 443393 Query 105037 CTTAACATGATAAACACGTCAGCGAGACCCTGAACACCAATACCGATGGGTCTGTGACGC 105096 | | ||| ||||| || || || || ||||||||||| || | || | || Sbjct 443392 CGAAGCATCATAAAGCAATCTGCAAGTCCTTGAACACCAATTCCAAGCGGGCGATGTTTT 443333 Query 105097 ATATTTGAACGTTTCCCGTTTTCGGTTGGGTAAAAGTTTTTATCAATAACCTTGTTTAAG 105156 | |||||| ||| | | | | | ||| | | ||||| || |||||||| Sbjct 443332 AGATTTGAGTTTTTACATTCTGGGAGAGAATAATATCCGTGATCAACAATTTTGTTTAAA 443273 Query 105157 TTACGTGTAACCATTTTCGTAACACGATGTAACTCTTCATGGTTAAACTCGTTCTTCTCG 105216 || | |||| | | ||||||| | ||||| ||| || || || || || Sbjct 443272 TTCCTCGTAATAACTCTCGTAACTTCCTTTAACTTATCAAAGTCGAATGTTTTGTTATCT 443213 Query 105217 ACATCAACGTATTTTGGTAACGCGATTGATGCGAGATTACATACGGCGGTTTCTTCCTTA 105276 ||||| | || || | | || || || || ||||| || || |||| | || Sbjct 443212 TTGTCAACAAACTTCGGAAGACCAATGGACGCCAGGTTACAAACAGCAATTTCAT--TTG 443155 Query 105277 TCC--GTAAACTCCAGAATTTCTGTACACAAATTTGATGATTTAATCGTACCAACGTGTT 105334 | || |||| | |||||| || || ||||| || ||| || || | | || Sbjct 443154 CGCTAGTGTACTCTATAATTTCGGTGCATAAATTACTGGAAACAATAGTCCCCAAATTTT 443095 Query 105335 TATGGTTCGACTTTTCATTACACGCGTCTTTGTAAAGCATAT--ATGGGGTTCCCGTTTC 105392 | ||||| ||| ||| ||||| |||| |||| || | || ||||| ||||| Sbjct 443094 TCTGGTTACTCTTACTATTCGCAGCGTCCTTGT--AGCAGATGAAAGGCGTTCCTGTTTC 443037 Query 105393 ACTTTGGGATTTAATAATTGCTTTCCAAATCTCCGAAGCTGGTACAACTTTAGTTGCGAT 105452 | |||| | || | ||| ||||| | | || | | ||| || || Sbjct 443036 AATTTGAGCTTGTAGGATTAAAAACCAAAGTTTCTGCGCCTTCATAGTTTTTCTTCCGCG 442977 Query 105453 ACCTTCAGATTCGTATTTCTCGTAAAGATCTTCAAACTCTTTACCGTACACGTCTGAAAG 105512 || | |||||| | || || || | | |||||| | ||| | || ||| | Sbjct 442976 GCCCTGCTTTTCGTACTCTTCATATAGTTTCTTAAACTCATCACCCCAAACATCTTGCA- 442918 Query 105513 ACCCTTTGC-CTGATCAGGACAAAACAATGACCAATTACCATCGGATTCAACGCGTTTCA 105571 |||| ||| | ||| ||||| | | | ||||| || ||||| | | || Sbjct 442917 ACCCCCTGCATTCATCCGGACACATAAGAGTCCAATCTTGGTCTTTCTCAACCCTCTCCA 442858 Query 105572 TGAACAAATCTGGAATCCACATGGCTGAAAAGAGGTCTCGACACCTCGCCTCTTCATCAC 105631 | || | ||| |||| ||| | ||| | ||||||||| || || ||| ||| || | | Sbjct 442857 TAAATAGATCAGGAACCCAAAGGGCAGGAAAGAGGTCACGGCATCTCATCTCCTCTTTTC 442798 Query 105632 CTTGATTCAAACGAATTTCGAGAAAATCGAGAATATCGGCGTGCCATGGTTCTAAATAGA 105691 | |||||| | ||||| | ||| || | || ||| | ||||| || || ||||| | Sbjct 442797 CATGATTCTTTCTTATTTCAATAAACTCCACAACATCTACATGCCACGGCTCCAAATAAA 442738 Query 105692 CTGCAATAGACCCTTTACG---ACGCCCCGCTTGATTGACATATCTTGCGGTTGAGTTAT 105748 |||||| | || || || | || |||| | | |||||| || || |||| Sbjct 442737 TTGCAATCGCACCCTTGCGTTTCCCTCCACCTTGGTCAATATATCTAGCAGTATCATTAT 442678 Query 105749 ACACTCGTAACATTGGAATAATACCATCGGATGTTCCATTTGTTCCACGAATATGTGATT 105808 | || |||||||||||||| | |||| || ||||||| || || ||||||| || Sbjct 442677 AAACGCGTAACATTGGAATCAGTCCATTAGACCTTCCATTGGTACCCCGAATATACGAGC 442618 Query 105809 TATTTGCACGTACATCGTGAACGTGTAAC-CCAATACCCCCAGCCCACTTACTGATACGC 105867 || | | | || || || || |||| ||| || || |||||| ||| Sbjct 442617 CCGTTCCTCTAATATTACTCAC-TGCCACTCCAAGACCGCCGGCAGTCTTACTAATATTT 442559 Query 105868 GCACACTCTTTTACTGTATCGTAAATACCGTCGATACTATCTTC-CTTATTCGCAATCAG 105926 ||||| | | ||| || || ||||||| || ||| ||| || ||||| | | | Sbjct 442558 GCACATTTTGTTAGCGTGTCAAAAATACCATCTATAGAATCCTCTGGTATTCTGAGT-AA 442500 Query 105927 GAAACACGATGACATTTGTGGTCTGGGTGTACCAGCATTGAACAGAGTTGGTGTTGCATG 105986 ||||| ||||||||||| ||||| || || || | ||||| || || ||||| ||||| Sbjct 442499 AAAACAAGATGACATTTGAGGTCTTGGAGTGCCGGAGTTGAAAAGCGTAGGTGTAGCATG 442440 Query 105987 AATGAACAAACCTTT-CGATAACGCTTCGTATGTTTCCAGGACGTGATCAATATCGTGTC 106045 | || | || ||| |||||| || |||||||| || | || ||||| | Sbjct 442439 GGT-AAAATACTTTTGCGATAATAATTTATATGTTTCGAGTGCAGCCTCGATATCACCGC 442381 Query 106046 CATGAATACCAATAGCGACGCGCATATAG-AGATATTGGGGTGTTTCAATAATTTCACCG 106104 ||| |||||| || || | ||| ||| |||| ||| ||| | || | ||| | Sbjct 442380 AATGTATACCACAAGAAACTCTCAT-TAGAAGATGTTGTGGTCTCTCTACAATCTTGTTA 442322 Query 106105 TCAATTTTCTGGAGATA--CCCTTTTTCAAGTGTTTTTAAACCAAAATACCCAAACTCAA 106162 |||||| | | ||||| ||||| | || ||||| || ||||||| || | |||| Sbjct 442321 TCAATTCTGAGAAGATAGGACCTTTCTAAA--GTTTTGAATGCAAAATAATCATATTCAA 442264 Query 106163 AATC 106166 |||| Sbjct 442263 AATC 442260 >seq25 Length=676938 Score = 163 bits (180), Expect = 4e-35 Identities = 462/698 (66%), Gaps = 30/698 (4%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||||||| ||||| || || || ||||| || || || ||||||||| |||| Sbjct 83607 TCGAAATCCTCACCTCCTAAATGGGTATCACCACTTGTGGCAACGACTTCAAA--TACCC 83550 Query 7517 CCTT--CAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTA 7574 | || ||||| | || | ||||||||||| ||||||||||||| ||| | | | | Sbjct 83549 CATTATCAATGGTCAAGAGTGAAACATCAAAAGTACCACCACCCAAATCATACACCAAGA 83490 Query 7575 CGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634 | || | || | |||||||| | ||| | || ||||| || || ||||||| Sbjct 83489 TGCTCTTCTCAGC------CTTCTTATCTAAACCAAAAGCAATAGCTGCTGCTGTTGGTT 83436 Query 7635 CATTAATAATACGAA-GACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693 | ||||||||||||| ||| |||| |||||||| | | || || || || ||||| Sbjct 83435 CGTTAATAATACGAATTACA-TTCAAACCAGCAATGGCACCAGCGTCCTTAGTGGCTTGA 83377 Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753 ||||| | ||| |||||||| || || || || | || |||| | || | ||| ||| Sbjct 83376 CGTTGAGCATCATTAAAGTAAGCTGGTACAGTAATTACTGCGTGTTTTACCTCCTTTCCG 83317 Query 7754 AGATACGATTCCGCGATATCTTTCAT-TTTGGTAAGAACCATCGATGAAATCTCTTCAGC 7812 ||||| | ||| || || |||||||| || | ||| ||||| | |||| || || | Sbjct 83316 AGATAAGCTTCAGCAATCTCTTTCATCTTAAGCAAG-ACCATAGCAGAAACTTCCTCTGG 83258 Query 7813 CGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAAT-CATGGGTT--TATCCGCAGC 7869 || ||||| ||| | || || |||| ||| | ||| | || || | || | Sbjct 83257 AGCTAACTGCTTCTTCTCGCCTTTAACTGTAACCTGAATGTAAGGCTTACTTTCTTTATT 83198 Query 7870 ACCGGGGATAACCTTATACG--ACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAA 7927 | |||| | ||| | | ||| | || |||| | |||||| | ||| Sbjct 83197 A------ATAATTTCATATGGTAACAA--TGTCTTATCCTTTTGGACGGAATCATCCTTG 83146 Query 7928 AACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTT 7987 || | || ||||| | |||| ||||||| | || | || || || | | Sbjct 83145 AAACGACGGCCAATAAGTCTCTTTACATCAAACAAGGTCTGAACCGGATTGATTGTAGCC 83086 Query 7988 TGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGAT 8047 ||||| || || | || ||||| | | ||||| | || ||||| | || || ||| Sbjct 83085 TGGTTTTTAGCTGACTCACCGATTAATCTTTCATCA---TCAGTAAATGATACATAAGAT 83029 Query 8048 GGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACG 8107 || || | || || ||||| || || | |||||||||||| | | || | | | Sbjct 83028 GGTGTAATACGGTTACCTTGTTCATTTGGAATAATTTCTACTCTACCATTCTTGTAAATA 82969 Query 8108 CCGACGCACGAATACGTTGTTCCTAAATCAATACCGAT 8145 || || || ||||| || || |||||||||||||| || Sbjct 82968 CCAACACATGAATAAGTAGTACCTAAATCAATACCAAT 82931 Score = 143 bits (158), Expect = 3e-29 Identities = 365/554 (66%), Gaps = 11/554 (2%) Strand=Plus/Minus Query 6611 TCAATGTCTTCTTTCGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTA 6670 |||||||| |||| || | ||| ||||||||||| || || |||||||| || |||||| Sbjct 84444 TCAATGTCCTCTTGAGAAAGTCTACCCTTATCATTTGTGATAGTAATCTTCTCAGATTTA 84385 Query 6671 CCCGAGGCCTTATCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTT 6730 || | | ||||||| ||||| || | |||||||| | | ||||| || || | Sbjct 84384 CCAGTACCTTTATCTTTTGCACTGACTTGTAAAATACCGTCAGTATCAATTTCAAAGGTA 84325 Query 6731 ACATTAATTTGTGGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCA 6790 || | ||| || || ||| || || || | ||||| || | | ||||| | || Sbjct 84324 ACCTCAATCTGAGGAACACCTCTTGGAGCTGGAGGAATTCCAGAAAGCTCAAACTTTCCG 84265 Query 6791 AGTAAACTGTTATCCGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCA 6850 |||| |||| ||| | | | | ||||||||| ||||| || | ||| || || Sbjct 84264 AGTAGGTTGTTGTCCTTGGTCATTGGACGTTCACCCTCATAAACCTGAATAAGTACGGCT 84205 Query 6851 GGTTGATTATCTTGTGCCGTTGAGAAGA-TTTGTTCTTTCTTAGATGGAATCGTCGTATT 6909 ||||| ||||| || || ||| | | | ||||| || | ||||| || || Sbjct 84204 GGTTGGTTATCCTGGTAAGTACTGAAAACCTGGCTCTTT-TTGGTTGGAACAACTGTGTT 84146 Query 6910 TCTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGT 6969 ||| ||| | | |||||||| ||||| | ||| || | || | || || ||| || Sbjct 84145 TCTACCAATGAGCTTGGTCATAACTCCACCAACAGTCTCAATACCCAAAGTCAAAGGAGT 84086 Query 6970 CACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGC 7029 || ||||| | || | || | || || || || | ||| || |||| Sbjct 84085 AACATCCAATAATAGTAAATCACTACCA---------CCCTCGCCTGCTAATATACCGGC 84035 Query 7030 TTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTT 7089 ||| || | || || || || || || ||||| ||||| || | | || | || || Sbjct 84034 TTGTACAGCAGCACCATAGGCAACGGCTTCATCTGGGTTGATTCCTCTGTTTGGCTCCTT 83975 Query 7090 ACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGAC 7149 |||| ||| | ||| | || || || || || || || ||||| |||||||| Sbjct 83974 CCCGTCAAAGAACTCCTTAATCAAGGCCTGGATCTTGGGAATACGAGTCGAACCACCGAC 83915 Query 7150 CAAAACGATTTCAT 7163 |||||||||||||| Sbjct 83914 CAAAACGATTTCAT 83901 >seq4 Length=889257 Score = 113 bits (124), Expect = 6e-20 Identities = 330/503 (66%), Gaps = 13/503 (3%) Strand=Plus/Minus Query 183159 ATCCGGTACCAATACCTTCAGTTCCATTTACCAAAACGGTCGGTAATATAGGAACATAAT 183218 |||| || || ||||| ||||| ||||| || | || | || | || |||||||||| Sbjct 5191 ATCCTGTTCCTATACCATCAGTACCATTAACTAGAATCATTGGAATGATTGGAACATAAT 5132 Query 183219 AGTCAGGTTCGATTTGTTTACCGTCGTCGTCGAGATAGTTTAATACTGGATCATC---TT 183275 | ||| || || |||| || || || | | || |||||| |||||||| || Sbjct 5131 ACAAAGGCTCAATCTGTTGTCCATCATCATATAAGTAAGTTAATAAAGGATCATCAGCTT 5072 Query 183276 TGGGATCAAAAAGTATTCTCGCGTTTTTAGTCAATTTTGTAAATATATACCTGGTTTGAC 183335 ||| || | ||| || | ||||| | ||| ||||||||||| | | || Sbjct 5071 CTGGA--AATATATAT-CTAGTCCATTTAGATAGTTTAGTAAATATATAACGAGCAGCAC 5015 Query 183336 TCGCGTCTTTACCACC---CATGAGACGTGTACCAAATTGACCACATGGTTCGAGTAAAT 183392 | || || || ||||| | | || |||||||||||||||||||||| | ||||| Sbjct 5014 TTGCATCCTTTCCACCTTCCTTTCTAC---TACCAAATTGACCACATGGTTCTAATAAAT 4958 Query 183393 TAATATTATTCGACCCCGTAAAATTATGTGCTAATTTTACAATTGTATCTGCCAAAGAGA 183452 | | |||||| || ||| || || || | ||||| || ||| | | || Sbjct 4957 TTAGATTATTGCTTCCAACAAAGTTTTGAGCCATATTTACTATAGTACTTTGTAGTGAAG 4898 Query 183453 CTTCACCGTGGTGATACGATGTTTTTTCCGAAACGTATGCGGCTAATTGCGCAACCTTCA 183512 ||| ||||| ||||| | | | ||| | ||| || | |||||||| ||||||| | Sbjct 4897 ATTCTCCGTGATGATAAGCACTATGTTCAGCAACATAACCAGCTAATTGTACAACCTTAA 4838 Query 183513 TTTCAGATGTAAGATTCTTTGTGAAACACGCGTATAACACTTTTCGTTGGGATGGTTTTA 183572 |||| |||| ||||| | || || | | || |||| ||| ||||||| Sbjct 4837 GTTCATTATTAAGTTTCTTCTTAAATGTTGCAAAAAGTACCTTTCTTTGTCCAGGTTTTA 4778 Query 183573 AACCATCTGAAACGTGTGCAATCGACCTTTTCAAATCAGCAAGACTGAAATTTACAAGAT 183632 | |||||| | | | || ||| || || | |||| || || |||||| | Sbjct 4777 ATCCATCTAATAAATTTGGAATAGATCTAGTAGTATCATATCTGCTAAATAATACAAGTT 4718 Query 183633 CTTTATGAATAAAATCAGAAATA 183655 ||||||| ||||||||| ||||| Sbjct 4717 CTTTATGTATAAAATCA-AAATA 4696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132585642680