Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20ubiquitum_20[genbank_20GCA_5F001835705.1_202016- 10-24] 27 sequences; 8,965,564 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq13 363 1e-94 seq25 232 4e-55 seq7 170 1e-36 seq26 163 2e-34 seq18 136 3e-26 seq4 116 2e-20 seq1 91.5 1e-12 >seq13 Length=315713 Score = 363 bits (402), Expect = 1e-94 Identities = 663/962 (69%), Gaps = 19/962 (2%) Strand=Plus/Minus Query 475318 TGACGTAACTTTACTATCACTCGAAGATGGTCTTTTCTCTGTAAGAGCAACAGCTGGAGA 475377 ||| ||| | ||| || | | || |||||| | || || | || || ||||| || Sbjct 111430 TGATGTATCATTATTAACTATTGAGGATGGTATCTTTGAGGTTAAGGCTACTGCTGGTGA 111371 Query 475378 TTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGTATCATGGTGTGTTGAAGATTT 475437 | | || | |||||||||||||||||||| ||||||||| || || || |||| || Sbjct 111370 TACTCACTTAGGTGGTGAAGATTTTGATAACAGACTTGTAGAATTTTGCGTACAAGACTT 111311 Query 475438 CAAGAGGAAAAATAAAGTT---GATCTTTCAACATCTGCTAAAGCATTAAGACGTCTTAG 475494 ||||| || |||| || | ||| | | ||| ||| | ||| |||||| | | || Sbjct 111310 TAAGAGAAAGAATAGAGGTATGGATTTAACTACAAATGCCAGAGCTTTAAGAAGATTAAG 111251 Query 475495 AACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGT 475554 |||| ||||||||||| ||| || || | || ||| | |||||| ||||| |||| | Sbjct 111250 AACTCAATGTGAACGTGCAAAGAGAACTTTATCATCTTCAACTCAAGCTACTATTGAGTT 111191 Query 475555 TGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAAATTTGAAGA 475614 ||||| |||| |||||| ||||||||| | | |||| || |||| ||||||||| Sbjct 111190 GGATTCACTTTATGAAGGTATTGATTATTCAATTGCCATTAGTAGAGCTAGATTTGAAGA 111131 Query 475615 TATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTCAGAGATTC 475674 | ||| ||||| ||| | ||| | | || ||||| |||| |||| ||| | Sbjct 111130 ACTCTGTGCTGATTACTTCCGTGCAACTTTAGCTCCAGTTGAGAAAGTACTCAAGGATGC 111071 Query 475675 TAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCC 475734 | | |||||| | || ||||| ||||| | || || ||||| || | ||||| Sbjct 111070 TGGTATGGACAAAAGATCTGTACATGATGTTGTTTTGGTTGGTGGTTCTACTCGTATTCC 111011 Query 475735 AAAAATAAGAGAAATGCTTTCATCATATTTTAATGGTAAAAAGTTAAATG-AAAGTG-TA 475792 ||| | || || || || |||||||| || || | || |||| | Sbjct 111010 AAAGGTCCAAGCCTTGATTCAGGAATTCTTTAATGGAAAGGAGCCA--TGCAAAGCAATT 110953 Query 475793 AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGT--- 475849 || || |||||||||||||| ||||| |||||||| ||||| ||||| ||| ||| Sbjct 110952 AACCCAGATGAAGCTGTTGCCTATGGTGCTGCTGTACAAGCTGCTATCTTAAATGGTGAG 110893 Query 475850 CAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGT 475909 ||||| | | || | |||| || || || ||||| | ||| | ||| Sbjct 110892 CAATCTTCTGCTGTTCAGGATC-TCTTGTTATTA--GATGTTGCTCCATTATCACTTGGT 110836 Query 475910 CTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGC 475969 | ||||| | ||| || |||||||||| |||||||| | || || |||||||| | Sbjct 110835 TTGGAAACTGCTGGTGGTGTTATGACTAAGCTTATTGAGCGTAACACAACTATCCCAGCC 110776 Query 475970 AAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATC 476029 ||||| || |||| ||| |||||||| | ||||| |||| |||| || ||| || Sbjct 110775 AAAAAGACACAAGTCTTTACCACTTATGCCGATAACCAAAGCGGTGTATTAATTCAAGTC 110716 Query 476030 TTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAA 476089 | ||||||||||||| | ||||| ||||| || ||||||| || | ||||| Sbjct 110715 TATGAAGGTGAAAGAGCCATGACTAAGGATAACCACCTTCTTGGAAAGTTCCACCTTGAT 110656 Query 476090 GGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCA 476149 |||||||| || || || ||||| || || |||||||| || ||||||||||||||||| Sbjct 110655 GGTATTCCACCAGCACCAAGAGGTGTACCACAAATTGAGGTCACTTTTGATATTGATGCT 110596 Query 476150 AATGGTATTCTTAATGTTACTGCTTGTGATAAATCTAGTAAC---AAGAGTAAAAATATA 476206 ||||||||| | || || | ||| ||||| |||| | || |||| || || Sbjct 110595 AATGGTATTTTGAACGTATCCGCTGTCGATAAG---AGTACCGGTAAAAGTAGCAAGATC 110539 Query 476207 ACTATTACAAACAATCGTGGTAGATTTACTGAAGAACAAATTCAACGTATGGTTGATGAA 476266 || ||||| ||| || |||||||| | | || | || ||||||||||| |||| Sbjct 110538 ACAATTACTAACGATAAGGGTAGATTATCAAAGGATGATATCGAACGTATGGTTAATGAT 110479 Query 476267 GC 476268 || Sbjct 110478 GC 110477 Score = 271 bits (300), Expect = 5e-67 Identities = 407/574 (71%), Gaps = 12/574 (2%) Strand=Plus/Minus Query 474308 AGTATATAAATGTCCAGAATTGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTA 474367 ||||| | || |||||| | ||||||||||||||||| || || ||| ||||| Sbjct 112048 AGTATCTGAAGGTCCAG-----CTATTGGTATTGATTTAGGTACCACATACTCGTGTGTT 111994 Query 474368 GCTGTTTGGCAAAATGGTAAAGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACA 474427 | ||| ||| ||||| || |||||| || || | ||||| |||||||| | |||||| Sbjct 111993 GGTGTATGGAGAAATGATACAGTAGATATTGTTCCAAATGATCAAGGTAACCGTACAACA 111934 Query 474428 CCATCATATGTTTCTTTTACTGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAA 474487 ||||||||||| | ||||| || ||||| | ||| ||||||||||| || || | ||| Sbjct 111933 CCATCATATGTAGCATTTACAGAGACTGAGCGTCTCATTGGAGATGCAGCAAAGAACCAA 111874 Query 474488 GCTGCATCTAATCCTGTTAATACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTT 474547 | ||| ||||| | |||||| | |||||||||||| | | |||||| | || ||| Sbjct 111873 GTTGCTAGAAATCCAGATAATACAGTCTTTGATGCTAAACGTCTTATTGGTAGAAAATTT 111814 Query 474548 GATGATACCA--CTGTCCAATCTGATATGCGTCATTGGCCTTTTAAGGT-GATAAATG-- 474602 || | |||| | || ||| ||||||| ||| ||||| ||||| | | || | | Sbjct 111813 GACG--ACCAGGCAGTGCAAAGTGATATGACTCACTGGCCATTTAAAATAGTTAGAGGCC 111756 Query 474603 TTGGTGGTAAACCATATATAGAAGCAATACACGCAGGTGAAACTAAACAATTTTCACCGG 474662 | |||||| ||| | || | |||||| | || |||| | | Sbjct 111755 CAAAAGACAAACCAATTATTAGTGTAAGTTATTTAGGTGAGAAGAAGGAATTCCATGCTG 111696 Query 474663 AACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGCGAGCTCATATCTTGGAC 474722 || |||||||| | ||||||||| || ||||| | | | |||| | |||| Sbjct 111695 AAGAAATTTCTGCTATGGTTTTACAAAAGATGAAGGAGATTTCTGAAGCATACTTGGGAC 111636 Query 474723 AAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAG 474782 | | | |||| ||| ||||||| ||||| ||||| ||||| ||||||||||||| Sbjct 111635 GCCCAATTAAGAATGCCGTAGTTACTGTACCAGCTTATTTCAATGACTCTCAACGTCAAG 111576 Query 474783 CAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAA 474842 ||||||| ||||| || |||||| ||| | ||||| | | |||||||| ||||||| Sbjct 111575 CAACTAAGGATGCAGGTGCAATTGCTGGTTTAAATGTAATGAGAATTATTAACGAACCAA 111516 Query 474843 CAGCAGCCGCACTTGCTTATGGTCTTGATAAGAA 474876 |||| || || |||||||||||||||||||||| Sbjct 111515 CAGCCGCAGCTATTGCTTATGGTCTTGATAAGAA 111482 >seq25 Length=676938 Score = 232 bits (256), Expect = 4e-55 Identities = 391/561 (70%), Gaps = 14/561 (2%) Strand=Plus/Plus Query 474332 ATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTA 474391 ||||||||||||||||| |||||||| ||||| | | ||| | ||||||| |||| Sbjct 82931 ATTGGTATTGATTTAGGTACTACTTATTCATGTGTTGGTATTTACAAGAATGGTAGAGTA 82990 Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451 ||||| ||| | ||||| |||||||| | | |||||||| ||||| || |||||||| Sbjct 82991 GAAATTATTCCAAATGAACAAGGTAACCGTATTACACCATCTTATGTATCATTTACTGAT 83050 Query 474452 ACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACT 474511 |||| | || || || | |||||| | || ||| || ||||| ||| | || Sbjct 83051 GATGAAAGATTAATCGGTGAGTCAGCTAAAAACCAGGCTACAATCAATCCGGTTCAGACC 83110 Query 474512 ATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTT---GATGATACCACTGTCCAATCT 474568 | ||||||| || ||| | ||||| ||| ||| |||||| || |||||| Sbjct 83111 TTGTTTGATGTAAAGAGACTTATTGGCCGTCGTTTCAAGGATGATTCC---GTCCAAAAG 83167 Query 474569 GATATGCGTCATTGG--CCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG 474626 |||| | ||||| || | | | | || ||| | |||| || || || | | Sbjct 83168 GATAAGA--CATTGTTACCATATGAAATTATTAATAAAGAAAGTAAGCCTTACATTCAGG 83225 Query 474627 CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAG 474686 | | ||| || | || || || | || || || ||||| | ||||| || Sbjct 83226 TTACAGTTAAAGGCGAGAAGAAGCAGTTAGCTCCAGAGGAAGTTTCTGCTATGGTCTTGC 83285 Query 474687 CCAAAATGAAACAAACCGCG--AGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAAT 474744 || |||||| | | || |||| ||||| ||| | || |||| | |||||||| Sbjct 83286 TTAAGATGAAAGAGATTGCTGAAGCT--TATCTCGGAAAGGAGGTAAAACACGCAGTAAT 83343 Query 474745 TACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAAT 474804 |||||| ||||| || ||||||||| ||||||||||||| ||||| || || || || Sbjct 83344 TACTGTACCAGCTTACTTTAATGATGCTCAACGTCAAGCCACTAAGGACGCTGGTGCCAT 83403 Query 474805 TGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGG 474864 ||| ||| | ||||| | ||||||||||| |||||||||||||| || |||||| ||| Sbjct 83404 TGCTGGTTTGAATGTAATTCGTATTATTAACGAACCAACAGCAGCAGCTATTGCTTTTGG 83463 Query 474865 TCTTGATAAGAATTCTGACAA 474885 | | |||||||| |||| || Sbjct 83464 TTTAGATAAGAAGGCTGAGAA 83484 Score = 113 bits (124), Expect = 3e-19 Identities = 133/180 (74%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 480590 AACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACG 480649 || ||| ||||||| |||||| || ||||| | ||| ||||||||||| || ||||| Sbjct 542051 AATATTGTAATCAGATAGAGTCCTACCGTCTTCCAATTGTTTTCCAGCAAAGATCAGACG 542110 Query 480650 TTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGT 480709 ||||||||||| || || ||||| ||||||||||||||| ||| ||| |||||||| Sbjct 542111 CTGTTGATCAGGTGGGATACCTTCTTTGTCTTGAATCTTTGCTTTTACATTCTCAATAGT 542170 Query 480710 ATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || | || | ||| | || || || || || || | ||| || || ||||| || Sbjct 542171 GTCTGAAGGTTCAACTTCCAATGTGATGGTCTTCCCAGTTAAAGTTTTTACAAAAATCTG 542230 >seq7 Length=503753 Score = 170 bits (188), Expect = 1e-36 Identities = 265/371 (71%), Gaps = 16/371 (4%) Strand=Plus/Plus Query 297322 GTTTTAGATTGTTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATTCATTATCCTTTT 297381 ||||| ||||||||||||||||| ||||| |||||||||| ||| ||||||| ||| Sbjct 364926 GTTTTTGATTGTTGGTTTGAATCTGGTTCAATGCCTTATGCATCTATTAATTATCCATTT 364985 Query 297382 GAAAATTCCGAAATTTTAGACACTTCACAAGATTATATTGCAGATTTTATAACAGAATCA 297441 |||||| ||| | || | | | | ||| | ||| |||||| | ||| | Sbjct 364986 GAAAATAAAGAATTATTTAAAAAT-----ATATT-TCCTGCTGATTTTGTTGGTGAAGGA 365039 Query 297442 ATTGATCAAACAAGAGGTTGGTTTTATACTTTATTAGTTCTTTCTACAGCTATATTTAAC 297501 | |||||||||||||| |||||||||||| | | || | |||||||| ||||| | Sbjct 365040 TTAGATCAAACAAGAGGATGGTTTTATACTCTTATGGTATTATCTACAGCATTATTTGAT 365099 Query 297502 AAACCAGCATTTAAAAATGTAATTGTTACAGGAATTGTTAACGCAGCTGATGGACAAAAA 297561 ||||||| ||||| ||| | || || | || | || ||| | ||||| ||||| Sbjct 365100 CAACCAGCTTTTAAGAATATTATAGTAAATGGTTTAGTATTAGCATCAGATGGTAAAAAA 365159 Query 297562 ATGTCAAAAAG--TAAAGGTAATTATCCTGATCCA-AATATTTTGATGGATAAATATGGT 297618 |||||||| || |||| ||||||||||||||| | || ||| | |||||||||| Sbjct 365160 ATGTCAAAGAGATTAAA--AAATTATCCTGATCCATTAGATATTG-TTAATAAATATGGA 365216 Query 297619 GCAGATACTTTACGTCTTTATTTATTATCAA--CACCTGTAGTTAAAGCCGAATCAATTA 297676 ||||| ||||| | |||||| | || || |||| ||||| | ||| ||| | | | Sbjct 365217 GCAGACTCTTTAAG--ATTATTTTTAATTAATTCACCAGTAGTAAGAGCAGAAACTTTAA 365274 Query 297677 AATTTGATGAA 297687 |||| | ||| Sbjct 365275 GATTTAAAGAA 365285 Score = 152 bits (168), Expect = 3e-31 Identities = 264/380 (69%), Gaps = 18/380 (5%) Strand=Plus/Minus Query 475790 GTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGT 475849 || || ||||||||||| |||||| |||||||| |||| |||| ||||| ||| Sbjct 272112 GTTAACCCTGATGAAGCCGTTGCAATGGGAGCTGCAATCCAGGCAGGAGTTTTAAAAGG- 272054 Query 475850 CAATCAGACGAGAAACTAAATAA-TATTGTACTTGTTGACGTAACTCCACTTTCATTAGG 475908 ||||| |||| | | |||| | |||| || ||||| | || ||||| Sbjct 272053 ----------AGAAATTAAAGACCTCTTGT--TGCTTGATGTTACTCCTTTATCTTTAGG 272006 Query 475909 TCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATG 475968 | ||||||| | || || || | ||| | || | ||||||||| | ||||| Sbjct 272005 TATTGAAACTTTGGGTGGAGTTTTTACTCGATTAATCAATAGAAATACTACAATCCCTAC 271946 Query 475969 CAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAAT 476028 ||| || |||| ||||| ||| | | || |||||||| || ||| || | Sbjct 271945 CAAGAAGAGTCAAGTCTTTTCTACTGCTGCAGACAATCAAACTCAAGTTGGAATCAAAGT 271886 Query 476029 CTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGA-ACTTTTA-ATCTT 476086 || |||| |||||| | || || || ||||| ||||||| | ||| | || | Sbjct 271885 TTTCCAAGGAGAAAGAGAGTTTGCTGCTGACAATAAGTTACTTGGACAGTTTGAGATGAT 271826 Query 476087 GAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGAT 476146 | || |||||||| ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct 271825 G--GGAATTCCTCCAGCTCCAAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATAGAT 271768 Query 476147 GCAAATGGTATTCTTAATGT 476166 |||||||| || | ||||| Sbjct 271767 GCAAATGGAATCATGAATGT 271748 Score = 131 bits (144), Expect = 1e-24 Identities = 325/487 (67%), Gaps = 10/487 (2%) Strand=Plus/Plus Query 295795 GATGGACCTCCATTTGCTACAGGAACTATGCATTATGGACATATTTTAGTCTCAACTATT 295854 ||||| || |||||||| |||||| | |||||||| ||||| | | || || Sbjct 363459 GATGGTCCCCCATTTGCAACAGGACTTCCACATTATGGCCATATACTTGCAGGTACAGTT 363518 Query 295855 AAAGATACCATGACTAGATATTTAACAATGAATGGTTATCAAGTTAATATGGGAATTGGT 295914 |||||| | || |||||| || || || ||| | | | | || |||| Sbjct 363519 AAAGATGTTGTTACAAGATATGCGACTCAAAAAGGATATTATTGTGAAAGAAGATTTGGA 363578 Query 295915 TGGGATTGCCATGGAGTTCCAATTGAA-ATGT--TGGCTaaaaaaaCTATCGGATATATC 295971 ||||||||||||||| | ||| | ||| ||| | | |||| || ||| ||||| | Sbjct 363579 TGGGATTGCCATGGATTACCAGTAGAACATGAAATAGATAAACAA-CTAA---ATATAAC 363634 Query 295972 AC--AAAGAAAGATTTATTGGAATACGGTATTGATCGTCATAATGATATTTGTCGTGATA 296029 | |||||| ||| | || | | || || ||| | ||||||| |||| | | Sbjct 363635 AAGTAAAGAA-GATGTTTTAAATAAAGGAATAGATTTTTATAATGAATCTTGTAGATCAA 363693 Query 296030 TGGTATTAAAATGTACTGATAAATGGTATTCTGATTTTGAGAGAATTGGAAGATGGATTG 296089 | ||||||| || |||| | ||||| || | || ||| |||||||| ||| | Sbjct 363694 TAGTATTAAGATATACTCAAGAATGGAGATCAACAGTAGAAAGAGTTGGAAGAATGATAG 363753 Query 296090 ATATTAATAATGAATATAAAACAATGGATAAAAATTTTATGGAATCTGTTATTTGGTCAT 296149 || || |||||| |||| |||||||||| ||| | |||| || | || ||| || Sbjct 363754 ATTTTGATAATGGTTATAGAACAATGGATTTAAAATATATGCAAACAGTATGGTGGGTAT 363813 Query 296150 TTAAACAACTTTATGAAAAGGAAATGATTTTTGAAGGTTATAAAGTTATGCCTTATTCTA 296209 |||||||||||| ||| || | | | | | || ||||| ||| ||||| ||||| | Sbjct 363814 TTAAACAACTTTTTGAGAAAAATCTAGTCTATAGAGCTTATAGAGTAATGCCATATTCAA 363873 Query 296210 CTGGTTGCAATACACCATTATCTCATTTTGAGGCAAAACAAAATTATAAAGAGATTATTG 296269 | | || |||||| | ||| ||||||| || | ||||||||||| | | || Sbjct 363874 CAGCATGTGCAACACCACTTTCTAATTTTGAATGTAATCTTAATTATAAAGATGTAAATG 363933 Query 296270 ATCCATC 296276 ||||||| Sbjct 363934 ATCCATC 363940 Score = 100 bits (110), Expect = 2e-15 Identities = 100/130 (77%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794 |||| || || ||||| ||||| || ||||||||||||||||| ||||||||||| || | Sbjct 272780 ATGCCGTTATCACTGTACCAGCTTACTTTAATGATTCTCAACGACAAGCAACTAAGGACG 272721 Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854 | || || ||||| | |||||| | | || ||||| || ||||||||||| || Sbjct 272720 CTGGCTCTATAGCAGGCTTAAATGTTACAAGGATCATTAACGAGCCAACAGCAGCAGCCT 272661 Query 474855 TTGCTTATGG 474864 | || ||||| Sbjct 272660 TAGCATATGG 272651 >seq26 Length=437080 Score = 163 bits (180), Expect = 2e-34 Identities = 282/401 (70%), Gaps = 18/401 (4%) Strand=Plus/Plus Query 269113 CTCGTTAACAATTGTGTCGG-TCCACGCGCTCTAGAGTGAGTTTTATCGCCCACCATTTG 269171 |||||||||| |||| | | ||| | ||||||| ||| |||| || | ||||| || Sbjct 149949 CTCGTTAACA-TTGTTACAGCTCCTCTAGCTCTAGCATGAATTTTGTCATCAACCATATG 150007 Query 269172 TTTTAAACGCTGATAATATGTCGGACCAATAAATATTTT-GACATGCATTTTTTCTCCCG 269230 |||||| | ||||||||| || || |||||||||||| | ||| || | || ||||| Sbjct 150008 TTTTAATCTCTGATAATAAGTTGGTCCAATAAATATTCTCGACTCTAATCTCTT-TCCCG 150066 Query 269231 TCATACCATTTGTCATTGTTTCATTTCCCCATGCTTCATATCCG----TATGAAACTAGT 269286 | ||||| |||| ||||||||| | || | |||| |||| || || Sbjct 150067 TGTGGCCATTGTACATTACTTCATTTCCATTTTTTTGAAATCCAGAACTATGCAAACGGT 150126 Query 269287 TCATCATTTATTTTATTAATATCTACACCTGTAAATGGTGTCGCATCACCATATACTCCT 269346 | || | || | | || | |||||| || ||||||||||| | | |||| Sbjct 150127 TAGATATCTCTTCAACTGTAATTTT----TGTAAAAGGAGTCGCATCACCTTCCAATCCT 150182 Query 269347 TTAATAGCACATACTTTTCCTAATAGACATTCAATCAATTGTCCAATGGTCATACGTTTT 269406 | ||| |||||| |||| || | ||||||||||| || || ||||| ||||||||| Sbjct 150183 TGAATTGCACATGCTTTACCAAGAAGACATTCAATTAAATGGCCAATCGTCATACGTGAA 150242 Query 269407 GGCATACAATTAGGATTAATAATAATATCTGGCACAAGTCCAGATTTAGTAAATGGCATA 269466 || ||| || |||||| ||||||||||| || | || ||| || |||||| |||||| Sbjct 150243 GGAATAGCATGAGGATTCATAATAATATCCGGAATAATCCCATCTTGAGTAAAAGGCATA 150302 Query 269467 TCTGCTC---TATGAATTTTAAATCCAACTGTACCTTTTTG 269504 || ||| | || || ||| | |||| |||||| ||||| Sbjct 150303 TC--CTCAGTTCTGTATGTTATA-CCAATTGTACCCTTTTG 150340 >seq18 Length=776017 Score = 136 bits (150), Expect = 3e-26 Identities = 137/178 (77%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 817086 CAAAAATTTTAATAGATTTTTCATCTCCAAATATTGCAAAGGAAATGCATATTGGACACT 817145 ||||| | | || ||||||||||| |||||||||||||| ||||||||| | || || | Sbjct 453511 CAAAAGTAGTCATTGATTTTTCATCACCAAATATTGCAAAAGAAATGCATGTAGGGCATT 453452 Query 817146 TGAGATCTACAATAATTGGTGAATCTCTTTGTAGAATATATGAATTTTGTGGATGTGAAG 817205 ||||||||||||| |||||||| | | | ||| || | |||| | | || ||| | Sbjct 453451 TGAGATCTACAATCATTGGTGATACAATATCTAGGATTTTGGAATACTTGGAATTTGAGG 453392 Query 817206 TACAAAGAATAAATCATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGCATA 817263 | |||||| |||||| |||| |||||||| || |||||||| ||| | |||| ||| Sbjct 453391 TTTTAAGAATTAATCATGTTGGAGATTGGGGTACTCAATTTGGGATGCTTATTGAATA 453334 Score = 123 bits (136), Expect = 2e-22 Identities = 150/199 (75%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 480572 AAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTT 480631 ||||| ||| |||| ||| ||| ||||||| |||||||| ||| || | |||||| Sbjct 281286 AAGTGGACTC-CTTTTGAAT-ATTGTAATCAGAGAGAGTTCTTCCATCCTCTAATTGCTT 281229 Query 480632 TCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTG 480691 || ||||| || | ||| ||||||||||| |||||||||||||| |||||||||||| Sbjct 281228 CCCTGCAAAGATTAAACGCTGTTGATCAGGTGGAATTCCTTCCTTATCTTGAATCTTTGC 281169 Query 480692 TTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGA 480750 || ||| |||||| || || | || | || || ||| || || || || || || | Sbjct 281168 CTTTACATTTTCAATTGTGTCCGATGGTTCAACTTCCAA-AGTGATTGTCTTTCCTGTCA 281110 Query 480751 GAGTCTTAACGAAAATTTG 480769 ||||||||| ||||| || Sbjct 281109 AAGTCTTAACAAAAATCTG 281091 Score = 107 bits (118), Expect = 1e-17 Identities = 109/141 (77%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 480572 AAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTT 480631 ||||| ||| | ||| || ||| ||||||| |||||||| |||||| | |||||| Sbjct 281514 AAGTGGACTCTTTTTG--AATATTGTAATCAGAAAGAGTTCTTCCATCTTCTAATTGCTT 281457 Query 480632 TCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTG 480691 || || || || | ||||||||||||||| |||||||| ||||| |||||||||||| Sbjct 281456 CCCTGCGAAGATTAAACGTTGTTGATCAGGTGGAATTCCCTCCTTATCTTGAATCTTTGC 281397 Query 480692 TTTGACAGCTTCAATAGTATC 480712 || ||| |||||| || || Sbjct 281396 CTTTACATTTTCAATTGTGTC 281376 Score = 102 bits (112), Expect = 5e-16 Identities = 94/118 (80%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 480572 AAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTT 480631 ||||| ||| | ||| || | || ||||||| |||||||| |||||| | |||||| Sbjct 281742 AAGTGGACTCTTTTTGGATA--TTGTAATCAGAAAGAGTTCTTCCATCTTCTAATTGCTT 281685 Query 480632 TCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTT 480689 || || || || | ||||||||||||||| |||||||| ||||| |||||||||||| Sbjct 281684 CCCTGCGAAGATTAAACGTTGTTGATCAGGTGGAATTCCCTCCTTATCTTGAATCTTT 281627 >seq4 Length=889257 Score = 116 bits (128), Expect = 2e-20 Identities = 220/316 (70%), Gaps = 12/316 (4%) Strand=Plus/Minus Query 355247 ATCCAGTGCCAATACCTTCTGTTCCATTAACTAAAATCATTGGAATTACAGGTACATAAA 355306 |||| || || ||||| || || |||||||||| |||||||||||| | || |||||| Sbjct 5191 ATCCTGTTCCTATACCATCAGTACCATTAACTAGAATCATTGGAATGATTGGAACATAAT 5132 Query 355307 ATACTGGTTCAATCATTTTATTATCTTCAAATTGAT--GTTGCAATACATCAAAATCATG 355364 | | || |||||| || ||| ||| || | ||| |||| | | |||| Sbjct 5131 ACAAAGGCTCAATCTGTTGTCCATCATCATATAAGTAAGTT--AATAAAGGATCATCAGC 5074 Query 355365 TTGTATGAAAATATATTTAGTTAATTGATTGAGTTGTGTGAAGATATATCGTGCA---CT 355421 || | || |||||| |||| ||| | |||| || || ||||| || ||| || Sbjct 5073 TTCTGGAAATATATATCTAGTCCATTTAGATAGTTTAGTAAATATATAACGAGCAGCACT 5014 Query 355422 TGCATTATCTTTGCCTCCACTTAATCTTGTACCAAATTGACCATTGGGAAGTAATAAATT 355481 ||||| | | ||| | ||| ||| |||||||||||||| || ||||||||| Sbjct 5013 TGCATCCTTTCCACCTTC-CTT--TCTACTACCAAATTGACCACATGGTTCTAATAAATT 4957 Query 355482 TATGTTGTTACTTCCAACATAATTTTGTGCCATTTTTATTATAGT-TTCAGTCATTGACT 355540 || || || ||||||||| | ||||| ||||| |||| |||||| | || | ||| Sbjct 4956 TAGATTATTGCTTCCAACAAAGTTTTGAGCCATATTTACTATAGTACTTTGT-AGTGAAG 4898 Query 355541 GTTCTCCATGATGATA 355556 |||||| |||||||| Sbjct 4897 ATTCTCCGTGATGATA 4882 >seq1 Length=1292604 Score = 91.5 bits (100), Expect = 1e-12 Identities = 87/109 (80%), Gaps = 2/109 (2%) Strand=Plus/Minus Query 825452 CCAGGATGGCATATTGAATGTTCTACAAT-GATTCATAAAACAATAGGAAATCATCTTGA 825510 |||||||||||||||||||||||| ||| | |||| || ||| | ||| | | | || Sbjct 236456 CCAGGATGGCATATTGAATGTTCTGTAATGGCTTCA-AATACACTTGGATTCCCTATAGA 236398 Query 825511 TATACATTTTGGAGGAATTGATTTAAAATTTCCTCATCATCACAATGAA 825559 ||| ||| |||||| ||||| |||| ||| ||||||||| |||||||| Sbjct 236397 TATTCATAGTGGAGGTATTGACTTAAGATTCCCTCATCATGACAATGAA 236349 Score = 91.5 bits (100), Expect = 1e-12 Identities = 126/178 (71%), Gaps = 9/178 (5%) Strand=Plus/Minus Query 895163 CCAGGAGTAAAAGATGTTGTCAAATTATGGGTCGAAAAGACGGAGATGAATTATCTGTTT 895222 |||| | ||||||||| || ||||| ||||| || |||| | |||||| | || | Sbjct 680360 CCAGAATTAAAAGATGCTGCCAAATCATGGGAAGACAAGAAAGTGATGAACAACCTTGTG 680301 Query 895223 CTCAAATTATTTATCCTTGCATGCAAGTTGCAGATATTTTTGAACTCGAACCTGAAGGAA 895282 || | | ||||||| ||||||||| ||||||||| || | ||| || | Sbjct 680300 CTTCAGTATTTTATCCATGCATGCAATGTGCAGATATATTCCAGCTCAAAGC-------- 680249 Query 895283 TAGATATTTGTCAATTAGGTGTTGATCAACGTAAAGTTAATATGCTCGCTCTCGAATA 895340 ||||||||| || |||| | |||||| | |||||||||||||| ||| ||||| Sbjct 680248 -AGATATTTGCCAGCTAGGGATGGATCAAAGAAAAGTTAATATGCTTGCTAGGGAATA 680192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268178041838996