Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20ubiquitum_20[genbank_20GCA_5F001835715.1_202016- 10-24] 276 sequences; 9,100,863 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq211 554 3e-152 seq198 235 4e-56 seq193 143 2e-28 seq103 111 1e-18 seq183 109 4e-18 seq45 104 2e-16 >seq211 Length=115256 Score = 554 bits (614), Expect = 3e-152 Identities = 1017/1474 (69%), Gaps = 46/1474 (3%) Strand=Plus/Minus Query 517265 ACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTC 517324 || || | ||||||||| ||||| | |||||| ||||| |||||||| || || ||||| Sbjct 4562 ACGTTCAAAATACCATTAGCATCAATATCAAAAGTGACCTCAATTTGTGGTACACCTCTT 4503 Query 517325 TGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAAT 517384 | || ||||| || || || | | || |||| ||| | ||||| ||||| | Sbjct 4502 GGTGCTGGTGGAATACCATCAAGGTGGAACTTTCCAAGAAGGTGGTTATCCTTAGTCATG 4443 Query 517385 TTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAG---TTTGATTATCTGAATAAGTT 517441 || |||||| || | | ||| || ||| |||| |||| ||||| | |||||| Sbjct 4442 GCTCTTTCACCTTCATAGACTTGAAT--TAA-TACACCGCTTTGGTTATCGGCATAAGTG 4386 Query 517442 GTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATA 517501 ||||| ||| | ||||| || || |||||||| | ||||||| || |||||| Sbjct 4385 GTAAAGACTTGTGTCTTTTTGGCTGGGATAGTTGTGTTACGCTCAATAAGCTTAGTCATA 4326 Query 517502 ATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTT 517561 | |||||| || ||||| |||||||| || | |||| ||||| | || | | || Sbjct 4325 ACACCACCAGCAGTTTCCAAACCAAGTGATAATGGAGCAACATCTAATAACAAGAGATCC 4266 Query 517562 TGAAGTTTTTCATCAGTTTGACCAACA---AGAATAGCTGCTTGAATAGCAGCACCATAT 517618 |||| || || ||| || || | ||||| ||||| | |||||||||||| Sbjct 4265 TGAACAG---CAGAAGATTGCTCACCATTTAAGATAGCAGCTTGTACAGCAGCACCATAG 4209 Query 517619 GCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATT--TG 517676 |||||||||||||| || |||| | || | | | || ||||| ||| |||| || Sbjct 4208 GCAACAGCTTCATCTGGGTTAATTGCTTTGCATGGCTCCTTTCCATT-AAAGAATTCCTG 4150 Query 517677 AAAGAAGTTGTCTT--ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATG 517734 || ||| ||| ||||| |||||||||| || || ||||| || |||| ||||| Sbjct 4149 AATCAAGG---CTTGGACCTTTGGAATACGAGTAGAACCACCAACCAAAACAACATCATG 4093 Query 517735 CACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGC 517794 || | ||| |||| | |||| | ||||| ||||| || | | | || Sbjct 4092 TACAGATCTTTTGTCCATACCAGCATCCTTGAGTACTTTCTCAACTGGAGCTAAAGTTGC 4033 Query 517795 TCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATT---ATA 517851 | || | || | ||| |||||||| ||| |||||||| ||| || || | ||| Sbjct 4032 ACGGAAGTAATCAGCACAGAGTTCTTCAAATCTAGCTCTACTAA---TGGCAATTGAATA 3976 Query 517852 ATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGC 517911 |||||| ||||| | | ||||| | ||||| |||| |||||| ||||| |||| | Sbjct 3975 ATCAATACCTTCATAAAGTGAATCCAACTCAATAGTAGCTTGAGTTGAAGATGATAAAGT 3916 Query 517912 ACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAA 517971 | || |||||||||||| || |||| ||||| ||| ||| | || | | | || Sbjct 3915 TCTCTTTGCACGTTCACATTGAGTTCTTAATCTTCTTAAAGCTCTGGCATTTGTAGTTAA 3856 Query 517972 ATCTGT---TTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATC 518028 ||| | | ||| |||||||| || |||| || || || |||||| | ||||| Sbjct 3855 ATCCATACCTCTATTCTTTCTCTTAAAGTCTTGTACGCAAAATTCTACAAGTCTGTTATC 3796 Query 518029 AAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATC 518088 |||||||||||| || || | ||||| || | ||||| | || | || | ||||| Sbjct 3795 AAAATCTTCACCACCTAAGTGAGTATCACCAGCAGTAGCCTTAACCTCAAAGATACCATC 3736 Query 518089 TTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATT 518148 |||| || || | | ||||||| || |||||||||| ||| || || | ||||| Sbjct 3735 CTCAATAGTTAATAATGATACATCAAATGTACCACCACCCAAATCGAAGATCAAAACATT 3676 Query 518149 CATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATT 518208 | || | || |||||||||||||| |||| ||| || || |||||||| || Sbjct 3675 TCTCTCACCAGTTCCCTTCTTATCAAGACCATAAGCAATAGCTGCGGCTGTTGGTTCGTT 3616 Query 518209 AATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTG 518268 ||||||||||| ||||| | |||||||||| |||||||| ||||| ||||| | ||| Sbjct 3615 AATAATTCTCATTACATTTAAACCAGCAATTGCACCTGCATCCTTAGTTGCTTGACGTTG 3556 Query 518269 TGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTT---CTTTACCAAT 518325 || || || ||||| || || ||||||| ||||||| ||| || | | | | | Sbjct 3555 AGAGTCATTGAAATAAGCTGGTACAGTAACTACGGCAT-TCTTAATTGGGCGTCCCAAGT 3497 Query 518326 ATAAGCGCTT--GCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTG-- 518381 || |||| | | | ||||| || ||||| ||| | ||||||| ||| | Sbjct 3496 AT----GCTTCAGAAATCTCCTTCATCTTTTGTAAAACCATAGCAGAAATTTCTTCAGCA 3441 Query 518382 GGGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTT---ATTACCAA 518438 ||| ||| ||| ||| | ||| ||| || | |||||| || Sbjct 3440 TGGA--ATTCCTTCTTCTCACCTAAATAACTTACACTAATAATTGGTTTGTCTTTTGGGC 3383 Query 518439 CATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAAT 518498 | ||| | |||||||||||||| ||||||| ||| || ||||| | ||| | Sbjct 3382 CTCTAACTATTTTAAATGGCCAGTGAGTCATATCACTTTGCACTGCCTGGTCGTCAAATT 3323 Query 518499 CTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGAT 518558 ||||||||| | ||||| |||||||| | ||||| |||||| | ||| |||| | Sbjct 3322 TTCTACCAATAAGACGTTTAGCATCAAAGACTGTATTATCTGGATTTCTAGCAACTTGGT 3263 Query 518559 ATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTG 518618 || |||||||||||||| ||| | || ||||||||||||| ||||||||||| |||| Sbjct 3262 TCTTTGCTGCATCTCCAATGAGACGCTCAGTCTCTGTAAATGCTACATATGATGGTGTTG 3203 Query 518619 TGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACAC 518678 | || |||||||||||||| | || ||| || ||| || ||||| ||||||||| |||| Sbjct 3202 TACGGTTACCTTGATCATTTGGAACAATATCTACTGTATCATTTCTCCATACACCAACAC 3143 Query 518679 AACTAAAAGTTGTTCCTAAATCAATACCAATAGC 518712 | | || || |||||||||||||||||||| Sbjct 3142 ACGAGTATGTGGTACCTAAATCAATACCAATAGC 3109 Score = 102 bits (112), Expect = 6e-16 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 322243 ACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGC 322302 ||| || |||| |||||| || |||||||| ||||| ||| | | |||| |||||| || Sbjct 3648 ACCATAAGCAATAGCTGCGGCTGTTGGTTCGTTAATAATTCTCATTACATTTAAACCAGC 3589 Query 322303 AATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGT 322362 |||| | | | ||| ||||||||| | || | |||||| ||||| ||||||||||| Sbjct 3588 AATTGCACCTGCATCCTTAGTTGCTTGACGTTGAGAGTCATTGAAATAAGCTGGTACAGT 3529 Query 322363 AATAACTGCTTTATTAATAGG 322383 || || || || ||||| || Sbjct 3528 AACTACGGCATTCTTAATTGG 3508 >seq198 Length=90025 Score = 235 bits (260), Expect = 4e-56 Identities = 1009/1574 (64%), Gaps = 33/1574 (2%) Strand=Plus/Minus Query 517146 CTTCTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTC 517205 |||| |||||| | |||||| ||||||| | |||||| | |||| ||| | ||| | Sbjct 86579 CTTCGGCAAATTGCTCAGCTTCCTTAATCATGCGCTCAATGTCCTCTTGAGAAAGTCTAC 86520 Query 517206 CGCGATTATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCA 517265 | || ||| || |||||||| |||| ||||| || |||||| ||| | | Sbjct 86519 CCTTATCATTTGTGATAGTAATCTTCTCAGATTTACCAGTACCTTTATCTTTTGCACTGA 86460 Query 517266 CATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCT 517325 | | | |||||| | | ||| | ||||| || || ||||| ||||| || ||||| Sbjct 86459 CTTGTAAAATACCGTCAGTATCAATCTCAAAGGTAACCTCAATCTGAGGAACACCTCTTG 86400 Query 517326 GAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATT 517385 |||| || || || || | | ||| |||| || || || || || || | | Sbjct 86399 GAGCTGGAGGAATTCCAGAAAGCTCAAACTTTCCGAGTAGGTTGTTGTCCTTGGTCATTG 86340 Query 517386 TTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAA 517445 ||||| ||||| ||| || ||| || | | ||| ||||| ||||| | | Sbjct 86339 GACGTTCGCCCTCATAAACCTGAATAAGTACGGCTGGTTGGTTATCCTGGTAAGTACTGA 86280 Query 517446 ATACTCTGGAT-TTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATA 517504 | || |||| | ||||| |||| |||||||||| |||| | |||||||||| Sbjct 86279 AAAC-CTGGCTCTTTTTGGTTGGAACAACTGTGTTTCTACCAATGAGCTTGGTCATAACT 86221 Query 517505 CCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGA 517564 ||||| | || || | ||| | || | |||||| ||||| | || ||| | | Sbjct 86220 CCACCAACAGTCTCAATACCCAAAGTCAAAGGAGTAACATCCAATA-----ATAGT---A 86169 Query 517565 AGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACA 517624 | | | | || | || | | ||| | ||||| | |||||||||||| ||||| Sbjct 86168 AATCACT-ACCACCCTCGCCTGCTAATATACCGGCTTGTACAGCAGCACCATAGGCAACG 86110 Query 517625 GCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATT-TGAAAGAAG 517683 |||||||| || || | | ||| | | || || | || || | | || ||| Sbjct 86109 GCTTCATCTGGGTTGATTCCTCTGTTTGGCTCCTTTCCGTCAAAGAACTCCTTAATCAAG 86050 Query 517684 TTGTCTT-ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTG 517742 | || | ||| |||||||||| || || || || || || ||||||| |||| | Sbjct 86049 --GCCTGGATCTTGGGAATACGAGTCGAACCACCGACCAAAACGATTTCATCTACCTCAG 85992 Query 517743 ATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACA 517802 | || | | | | || |||||||| | ||| || |||| | |||||| | Sbjct 85991 ACTTCTTAATTCCAGCGTCTTCCAAAACTTTCTTAACTGGCTCAATAGTTTTTCTAAATA 85932 Query 517803 AGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTT 517862 |||| | || ||||| || |||||||| ||||| | | |||| | | | Sbjct 85931 GATCTGCGTTCAACTCATCGAACTTGGCTCTAGTCAGAGTCTCGCTCAAATCTACATCCT 85872 Query 517863 CGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCAC 517922 | | |||| |||| ||| | | || ||| | | ||||| || || | |||| Sbjct 85871 CCATCAAACCTTCAATTTCTACCTTAACTTGTGGAGCTGAAGAAAGGGCTCTCTTAGACT 85812 Query 517923 GTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAA-ATCTGTTTTA 517981 |||| || | || || || | | |||| | || || | || ||| ||| Sbjct 85811 TTTCAACCTCTCTTCTAAGCTTTTGAAGGGCTCTCT-TGTCAGACTTAACATCC-TTTCC 85754 Query 517982 TAT-TTTCTCTTGAA-ATCTTCAACACACCATGTTACAAGACGATTA--TCAAAATCTTC 518037 | | ||| ||| | ||||| | | | || | || || | || ||||| || Sbjct 85753 TGTCTTTGACTTAATGATCTTGATGAAA---TGGTCCATAACTCTCTGGTCGAAATCCTC 85697 Query 518038 ACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGA 518097 |||||| || | |||| || || || |||| || | |||| |||| | Sbjct 85696 ACCTCCTAAATGGGTATCACCACTTGTGGCAACGACTTCAAATACACCATTATCAATGGT 85637 Query 518098 CAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTT 518157 ||| || | |||||| || |||||||||| |||| | | | | || | |||| Sbjct 85636 CAAGAGTGAAACATCAAAAGTACCACCACCCAAATCATACACCA--AGATGCTCTTCTCA 85579 Query 518158 GTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCT 518217 | ||| ||||| | |||| | |||| ||| || || |||||||| |||||||| | Sbjct 85578 GCCTTC----TTATCTAAACCAAAAGCAATAGCTGCTGCTGTTGGTTCGTTAATAATACG 85523 Query 518218 CAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTT 518277 | ||||| | ||||||||| || || || ||||||||||| | ||| | ||| || Sbjct 85522 AATTACATTCAAACCAGCAATGGCACCAGCGTCCTTAGTGGCTTGACGTTGAGCATCATT 85463 Query 518278 AAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGC 518337 ||| || || || |||||||| || || | |||| || || || | |||||| || Sbjct 85462 AAAGTAAGCTGGTACAGTAATTACTGCGTGTTTTACCTCCTTTCCGAGATAAGCTTCAGC 85403 Query 518338 CGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGA 518397 | | |||||| ||| || | ||| | |||| || ||||| | | ||||| Sbjct 85402 AATCTCTTTCATCTTAAGCAAGACCATAGCAGAAACTTCCTCTGGAGCTAACTGCTTCTT 85343 Query 518398 TTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGG 518457 || || | || || | || || || ||| | | |||||||| || | |||| Sbjct 85342 CTCGCCTTTAACTGTAACCTGAATGTAAGGCTTACTTTCTTTATTAATAATTTCATATGG 85283 Query 518458 CCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTT 518517 | || || |||| ||| || | || || ||| | ||||| | || || Sbjct 85282 TAACAATGTCTTATCCTTTTGGACGGAATCATCCTTGAAACGACGGCCAATAAGTCTCTT 85223 Query 518518 TGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAAT 518577 | ||||||| | || | ||||| |||| ||| || | ||| |||| || || || Sbjct 85222 TACATCAAACAAGGTCTGAACCGGATTGATTGTAGCCTGGTTTTTAGCTGACTCACCGAT 85163 Query 518578 CAGATGTTCTGTC-TCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCAT 518636 | || || || || |||||||| ||||| ||||| || | || |||||||| |||| Sbjct 85162 TA-ATCTTTCATCATCAGTAAATGATACATAAGATGGTGTAATACGGTTACCTTGTTCAT 85104 Query 518637 TCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTA 518696 | | ||||||||| ||| ||||||| | | | ||| ||||| | |||| || |||| Sbjct 85103 TTGGAATAATTTCTACTCTACCATTCTTGTAAATACCAACACATGAATAAGTAGTACCTA 85044 Query 518697 AATCAATACCAATA 518710 |||||||||||||| Sbjct 85043 AATCAATACCAATA 85030 Score = 98.7 bits (108), Expect = 8e-15 Identities = 196/290 (68%), Gaps = 19/290 (7%) Strand=Plus/Minus Query 322084 GTCAAAATCTTCTCCTCCCAAATGTGTATTACCACCTACTGCTAATG--TTCTAAATACT 322141 ||| ||||| || ||||| ||||| |||| ||||| | || || | ||| |||||| Sbjct 85708 GTCGAAATCCTCACCTCCTAAATGGGTATCACCACTTGTGGC-AACGACTTC-AAATACA 85651 Query 322142 CCATTTGAGATATTCATTAACGAAACATCTAAAGTCCCAGCTCCTAAGTCATAAACAATT 322201 ||||| || ||| | |||||||| ||||| ||| | || || ||||| || | Sbjct 85650 CCATTATCAATGGTCAAGAGTGAAACATCAAAAGTACCACCACCCAAATCATACACCAAG 85591 Query 322202 ACGTTACCACCAGtttttttATTCCATTTTTCACTTCCTAAACCGTATGCAAGAGCTGCT 322261 | | | ||| || |||| ||||||| | |||| ||||||| Sbjct 85590 ATGCTCTTCTCAGCCTTCTTAT---------------CTAAACCAAAAGCAATAGCTGCT 85546 Query 322262 GCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCAATTTTAGCAGAATCAAGA 322321 || |||||||| ||||| || || |||| ||||| ||||| | ||| || | Sbjct 85545 GCTGTTGGTTCGTTAATAATACGAATTACATTCAAACCAGCAATGGCACCAGCGTCCTTA 85486 Query 322322 GTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTAATAACTGC 322371 || ||||| | || || |||||||| || |||||||||||||| ||||| Sbjct 85485 GTGGCTTGACGTTGAGCATCATTAAAGTAAGCTGGTACAGTAATTACTGC 85436 >seq193 Length=106267 Score = 143 bits (158), Expect = 2e-28 Identities = 327/485 (67%), Gaps = 28/485 (6%) Strand=Plus/Plus Query 303735 AAGTCCACCATCTCTTGATCTACCTTCTGGCGCTTGTCTTGTAAGTAACTGTGTT---GG 303791 ||||||||| ||||||| || |||||| | |||||| || |||| |||| | Sbjct 13805 AAGTCCACCTTCTCTTGCCCTTCCTTCTCTTGGTTGTCTCGT---TAACATTGTTACAGC 13861 Query 303792 TCCACGAGCGCGTGAGTGGGCCTTGTCGCCTACCATTTGTTTCAATCTCTGATAATATGT 303851 ||| | ||| | | || ||||| | ||||| ||||| |||||||||||||| || Sbjct 13862 TCCTCTAGCTCTAGCATGAATTTTGTCATCAACCATATGTTTTAATCTCTGATAATAAGT 13921 Query 303852 CGGACCAATAAAAATTTTA-ACTGGTAATTTTTTACCATTCATTCCATTATACATAGTTT 303910 || |||||||| ||| | ||| |||| | || || | ||||| ||||| || Sbjct 13922 TGGTCCAATAAATATTCTCGACTC-TAATCTCTTTCCCGTGTGGCCATTGTACATTACTT 13980 Query 303911 CATTACCCCATTCTTCATAACCAGCAGCAACTAATTCATCG-TTA---ATGGCATTAAGA 303966 |||| || || || | | |||| ||||| | || ||| || | | || Sbjct 13981 CATTTCCATTTTTTTGAAATCCAG----AACTATGCAAACGGTTAGATATCTCTTCAACT 14036 Query 303967 TCAACACTTGTAAATGGTGTTGCATCGCCATACACTCCTTTAACTGCACATAGTTTTCCT 304026 || ||||||| || || ||||| || | || ||||| || ||||||| ||| || Sbjct 14037 GTAATTTTTGTAAAAGGAGTCGCATCACCTTCCAATCCTTGAATTGCACATGCTTTACCA 14096 Query 304027 AATAAACATTCAATAAGTTGCCCAATAGTCATACGTTTGGGCATACAATTAGGATTGATA 304086 | | ||||||||| | || ||||| ||||||||| || ||| || |||||| ||| Sbjct 14097 AGAAGACATTCAATTAAATGGCCAATCGTCATACGTGAAGGAATAGCATGAGGATTCATA 14156 Query 304087 ATAATATCGGGAATTAATCCAGATTTACTGAATAACATATCTGCTCGATGAGCTTTGTAT 304146 |||||||| ||||| | ||| || | | || |||||| ||| || | ||||| Sbjct 14157 ATAATATCCGGAATAATCCCATCTTGAGTAAAAGGCATATC--CTC----AGTTCTGTAT 14210 Query 304147 ------CCAATGGTACCTTTTTGACCTGCTCTTGACGAAAATTTATCACCTACATTGGGA 304200 ||||| ||||| ||||| || ||| || | ||||||||| || || | || Sbjct 14211 GTTATACCAATTGTACCCTTTTGGCCATGTCTAGATGCAAATTTATCTCCGACGTGAGGT 14270 Query 304201 ATTCT 304205 ||||| Sbjct 14271 ATTCT 14275 >seq103 Length=16067 Score = 111 bits (122), Expect = 1e-18 Identities = 329/494 (67%), Gaps = 29/494 (6%) Strand=Plus/Plus Query 517155 ATTCTTTAGCTTCTCTAATCATTCTCTCAATTT--GATCTTCAGAGAATCTTCCGCGATT 517212 |||||| ||| ||||||| |||||| ||||||| || || | || | || || Sbjct 7035 ATTCTTCAGCCTCTCTAACCATTCTTTCAATTTCAGAACTGCTAAGG--CCACCA-GAAG 7091 Query 517213 ATTAGTAATAGTAATATTCTTGGATTTGTTT---GTTGATTTATCAGCGGCAGTCACATT 517269 ||| | || || || ||| || ||| ||| ||||| || ||| ||| ||||| Sbjct 7092 ATTGG--ATGGTGAT-TTCATG--TTTCTTTCCGGTTGACTTGTCAATCGCACCGACATT 7146 Query 517270 AAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGC 517329 | || ||||| ||||| | |||||| || |||||||||||||| || ||||| |||| Sbjct 7147 CATGATTCCATTTGCATCTATATCAAAAGTAACTTCAATTTGAGGAACTCCTCTTGGAGC 7206 Query 517330 AGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCG 517389 || || || || || | ||| ||| || ||||| || || || | || Sbjct 7207 TGGAGGAATTCCCATCATCTCAAACTGTCCAAGTAACTTATTGTCAGCAGCAAACTCTCT 7266 Query 517390 TTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATAC 517449 ||| || | ||||| || ||| |||| ||||||||| |||| | ||| | ||| || Sbjct 7267 TTCTCCTTGGAAAACTTTGATTCCAACTTGAGTTTGATTGTCTGCAGCAGTAGAAAAGAC 7326 Query 517450 TCTGGAT-TTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTG-GTCATAATACCA 517507 | || | || || ||| ||||| || ||||||| || | || | || | || ||| Sbjct 7327 T-TGACTCTTCTTGGTAGGGATTGTAGTATTTCTATTGATTA-ATCGAGTAAAAACTCCA 7384 Query 517508 CCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGT 517567 || ||||| | ||| | ||| | |||||| ||||||| | |||| || || Sbjct 7385 CCCAAAGTTTCAATACCTAAAGATAAAGGAGTAACATCAAGCA--ACAA------GAGGT 7436 Query 517568 TTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCT 517627 ||| | ||| || | || |||| || || ||||| || |||||| ||| Sbjct 7437 CTTT----AATTTCTCCTTTTAAAACTCCTGCCTGGATTGCAGCTCCCATTGCAACGGCT 7492 Query 517628 TCATCAGGATTAAC 517641 |||||||| ||||| Sbjct 7493 TCATCAGGGTTAAC 7506 >seq183 Length=117400 Score = 109 bits (120), Expect = 4e-18 Identities = 127/170 (75%), Gaps = 1/170 (1%) Strand=Plus/Minus Query 870806 GATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTAAGATCAACTATT 870865 |||| ||| || ||||||||||| |||||||||||| | || ||||| ||||| || || Sbjct 96259 GATTTTTCATCACCAAATATTGCAAAAGAAATGCATGTAGGGCATTTGAGATCTACAATC 96200 Query 870866 ATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGGACACGATGTTTATCGTATTAAT 870925 |||||||| | || | |||| | || ||| | | | || |||| | |||||| Sbjct 96199 ATTGGTGATACAATATCTAGGATTTTGGAATACTTGGAATTTGAGGTTTTAAGAATTAAT 96140 Query 870926 CATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATTGCTTATATTAA 870975 ||||| || |||||||| |||||||| || ||| | |||| ||| |||| Sbjct 96139 CATGTTGGAGATTGGGGTACTCAATTTGGGATGCTTATTGAATAT-TTAA 96091 >seq45 Length=29048 Score = 104 bits (114), Expect = 2e-16 Identities = 299/444 (67%), Gaps = 16/444 (4%) Strand=Plus/Plus Query 396953 TCGAATGGATTATCAACATTG-AATTTTTTGCGATAACCAAGATCTACAAGTAATCTGTC 397011 ||||| |||||| ||||||| || |||| | |||| ||| || | | ||| | ||| || Sbjct 19238 TCGAAGGGATTAGAAACATTGTAAATTTTGGGGATATCCA-GAGCAAAAAGGAGTCTATC 19296 Query 397012 AGCAACATATTTAATATATTGAGACATTAGTTCAGAATTCATACCAAGAAGTTTACACGG 397071 ||| ||| ||| ||||||||||| ||| ||| ||| ||||| |||| ||| | | || Sbjct 19297 AGCTACAAATTCAATATATTGAGCCATAAGTCTAGAGTTCATTCCAATAAGATCAACAGG 19356 Query 397072 AAGAGAATCATTAATAAATTCTTCTTCAATTTCAATCGCTTCGTCAATAATTTGGTAAAC 397131 ||| || ||| || ||| | | ||| | |||| ||||| |||||||| | || Sbjct 19357 AAGTGAGTCACAAAGAAAGTTTCTTTCTACATCAACAGCTTCTGAGATAATTTGTTGTAC 19416 Query 397132 AACAGATTCTTTCAAACGATTATTCAACA-ATGAATACATAATACAAGCAAGTTCTACAT 397190 ||| || | |||| || | | || || | ||||||| || ||| Sbjct 19417 TCTAGA-AGTTGGTAGTTTATATTTAAGAGCTTTGTATATTAAGCAAGCAAAGTCAGCAT 19475 Query 397191 GTTTGTTTTCATCACGAGCAATAAATTGATTTGATATAATTAGACCAGGCATTACATGCA 397250 || ||||||||| ||||| || ||| || | | || ||||||| || | || Sbjct 19476 GTAATCCTTCATCACGGCTAATAAGTTCATTAGAGAATGTAAGTCCAGGCA-TAAGTCCA 19534 Query 397251 TTTCTCTAGTTTTTAACCAGAAAATCGAAGCAAATGAT-CCACTAAAGAAAACGCCTTCT 397309 | || |||| | ||| || || | | |||| | | ||| ||| | || |||||| Sbjct 19535 ---CGCT--TTTTAAGCCAAAATATAGCA-CAAAAGCTACCAGAAAAAAGAATTCCTTCT 19588 Query 397310 ACAATAGAGAATGCTACTAATT-TGTGAGCATAAG-TCTTATCAGATTTAATCCATTTAT 397367 ||| | ||||| | | ||||| | | |||| ||| |||| ||| || ||||||||| Sbjct 19589 ACAGCACAGAAT-CCAATAATTCTCTCAGCAAAAGATCTT-TCATTATTCATCCATTTAG 19646 Query 397368 TACACCAATCAGCTTTCTTTTTAA 397391 | ||| || ||||||||||||| Sbjct 19647 TTGCCCATTCTGCTTTCTTTTTAA 19670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780808703970856