Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20ubiquitum_20[genbank_20GCA_5F001835715.1_202016- 10-24] 276 sequences; 9,100,863 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq211 262 3e-64 seq73 199 3e-45 seq198 176 4e-38 seq3 149 5e-30 seq103 147 2e-29 seq193 145 6e-29 seq183 122 7e-22 seq69 113 4e-19 seq124 107 2e-17 >seq211 Length=115256 Score = 262 bits (290), Expect = 3e-64 Identities = 572/847 (68%), Gaps = 21/847 (2%) Strand=Plus/Plus Query 551749 TATCTCTCGAAGATGGTCTCTTTTCTGTATTAGCTACTAGTGGAGATTCTCATCTTGGTG 551808 || || | || |||||| ||||| || |||||| ||| ||| |||| | |||| Sbjct 3725 TAACTATTGAGGATGGTATCTTTGAGGTTAAGGCTACTGCTGGTGATACTCACTTAGGTG 3784 Query 551809 GCGAAGATTTTGATAATAGACTGGTATCATGGTGTGTTGAAGATTTTAAACGAAAAAACA 551868 | |||||||||||||| ||||| ||| || || || |||| ||||| |||| || | Sbjct 3785 GTGAAGATTTTGATAACAGACTTGTAGAATTTTGCGTACAAGACTTTAAGAGAAAGAATA 3844 Query 551869 AAG---TTGATCTATCTACATCTGCCAAAGCTCTTCGTCGTCTAAGAACTGCTTGCGAAA 551925 || | ||| || ||||| ||||| |||| | | | |||||||| || ||| Sbjct 3845 GAGGTATGGATTTAACTACAAATGCCAGAGCTTTAAGAAGATTAAGAACTCAATGTGAAC 3904 Query 551926 GAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTAGATTCATTATTTG 551985 | || || || || | |||||| |||||| | |||||||| | |||||| | | || Sbjct 3905 GTGCAAAGAGAACTTTATCATCTTCAACTCAAGCTACTATTGAGTTGGATTCACTTTATG 3964 Query 551986 AGGGAATTGATTAT--AATACGCCTATTTCGAGGGCCAAATTTGAAGATATTTGTTCTGA 552043 | || ||||||||| ||| ||| ||| || || | ||||||||| | ||| |||| Sbjct 3965 AAGGTATTGATTATTCAAT-TGCC-ATTAGTAGAGCTAGATTTGAAGAACTCTGTGCTGA 4022 Query 552044 TCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCAAAGATTGATAA 552103 | ||| | ||| | | ||||| || |||| | | ||| | || || || Sbjct 4023 TTACTTCCGTGCAACTTTAGCTCCAGTTGAGAAAGTACTCAAGGATGCTGGTATGGACAA 4082 Query 552104 ATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGA 552163 | |||||||| |||| | |||||||| ||||| | ||||| || | | | Sbjct 4083 AAGATCTGTACATGATGTTGTTTTGGTTGGTGGTTCTACTCGTATTCCAAAGGTCCAAGC 4142 Query 552164 AATG-TTAAGTTCTTATTTCAATGGTAAAAA---ATTAAATGAAAGTGTTAATCCAGATG 552219 || || || || ||| ||||| || | || || | || |||| ||||||| Sbjct 4143 CTTGATTCAGGAATTCTTT-AATGGAAAGGAGCCATGCAAAGCAA---TTAACCCAGATG 4198 Query 552220 AGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCT---TTCTGGACAAACTGATG 552276 | ||||||||||||||||| || | ||||| ||||| | | || ||| || || Sbjct 4199 AAGCTGTTGCCTATGGTGCTGCTGTACAAGCTGCTATCTTAAATGGTGAGCAATCTTCTG 4258 Query 552277 AAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAG 552336 | || || | | | |||||||| |||| |||| |||||||| ||||| | Sbjct 4259 ---CTGTTCAGGATCTCTTGTTATTAGATGTTGCTCCATTATCACTTGGTTTGGAAACTG 4315 Query 552337 TTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTC 552396 ||| ||| |||||||||| ||||| || | || || ||||| || ||||| | | Sbjct 4316 CTGGTGGTGTTATGACTAAGCTTATTGAGCGTAACACAACTATCCCAGCCAAAAAGACAC 4375 Query 552397 GTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAG 552456 || ||| | || ||| | ||||| |||| | ||| ||||||| | | |||||| | Sbjct 4376 AAGTCTTTACCACTTATGCCGATAACCAAAGCGGTGTATTAATTCAAGTCTATGAAGGTG 4435 Query 552457 AAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTC 552516 ||||| | ||||| ||||| | | ||||| | || | | || |||||||| | Sbjct 4436 AAAGAGCCATGACTAAGGATAACCACCTTCTTGGAAAGTTCCACCTTGATGGTATTCCAC 4495 Query 552517 CTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTT 552576 | || || | || ||||| |||||||| || ||||| ||||| ||||| ||||| |||| Sbjct 4496 CAGCACCAAGAGGTGTACCACAAATTGAGGTCACTTTTGATATTGATGCTAATGGTATTT 4555 Query 552577 TGAATGT 552583 |||| || Sbjct 4556 TGAACGT 4562 Score = 217 bits (240), Expect = 1e-50 Identities = 380/550 (69%), Gaps = 5/550 (1%) Strand=Plus/Plus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 |||||| ||||| |||||||| |||||||| ||||||||||| ||| ||||| || Sbjct 3108 AGCTATTGGTATTGATTTAGGTACCACATACTCGTGTGTTGGTGTATGGAGAAATGATAC 3167 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 ||| || ||| || | ||||||||||||||| | || || ||||| ||||| | || || Sbjct 3168 AGTAGATATTGTTCCAAATGATCAAGGTAACCGTACAACACCATCATATGTAGCATTTAC 3227 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 || ||||| | | | |||| ||||||||||| | |||| || | ||||| || Sbjct 3228 AGAGACTGAGCGTCTCATTGGAGATGCAGCAAAGAACCAAGTTGCTAGAAATCCAGATAA 3287 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230 ||| | ||||||||||||||| | ||||| |||| ||| | || | | || || Sbjct 3288 TACAGTCTTTGATGCTAAACGTCTTATTGGTAGAAAATTTGACGACCAGGCAGTGCAAAG 3347 Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTC---TGGAAAACCTTATATTGA 550287 ||||||| || ||||| || |||| |||| | | | ||||| |||| Sbjct 3348 TGATATGACTCACTGGCCATTTAAAATAGTTAGAGGCCCAAAAGACAAACCAATTATTAG 3407 Query 550288 AGCTACTCATGAAGGATCTGTTAAACAATTTTCA-CCAGAACAAATTTCATCTATGGTTT 550346 | | | || ||| | | || | || || | ||| ||||||| ||||||||| Sbjct 3408 TGTAAGTTATTTAGG-TGAGAAGAAGGAATTCCATGCTGAAGAAATTTCTGCTATGGTTT 3466 Query 550347 TAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAA 550406 || || ||||| | | | || | | || | | ||| | |||| ||| Sbjct 3467 TACAAAAGATGAAGGAGATTTCTGAAGCATACTTGGGACGCCCAATTAAGAATGCCGTAG 3526 Query 550407 TAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTA 550466 | ||||||||||| ||||| |||||||| ||||||||||| ||||| ||||| || | Sbjct 3527 TTACTGTACCAGCTTATTTCAATGACTCTCAACGTCAAGCAACTAAGGATGCAGGTGCAA 3586 Query 550467 TTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATG 550526 ||||||| | ||||| | | ||||| || ||||| || || || || |||| |||| Sbjct 3587 TTGCTGGTTTAAATGTAATGAGAATTATTAACGAACCAACAGCCGCAGCTATTGCTTATG 3646 Query 550527 GACTTGATAA 550536 | |||||||| Sbjct 3647 GTCTTGATAA 3656 Score = 87.8 bits (96), Expect = 1e-11 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 361701 CAAGACCATAAGCTAATGAAGCAGCTGTTGGTTCGTTAATTATTTTAATAACATTGAGTC 361760 ||||||||||||| | | || ||||||||||||||||| ||| | || ||||| | | Sbjct 3652 CAAGACCATAAGCAATAGCTGCGGCTGTTGGTTCGTTAATAATTCTCATTACATTTAAAC 3593 Query 361761 CCGCTATTTTTGATGCATCTAAAGTGGCTTGACGTTGTGCATCATTAAAATATGCAGGAA 361820 | || ||| |||||| ||| ||||||||||| | ||||| ||||| || || | Sbjct 3592 CAGCAATTGCACCTGCATCCTTAGTTGCTTGACGTTGAGAGTCATTGAAATAAGCTGGTA 3533 Query 361821 CAGTAA 361826 |||||| Sbjct 3532 CAGTAA 3527 >seq73 Length=57455 Score = 199 bits (220), Expect = 3e-45 Identities = 278/381 (73%), Gaps = 14/381 (4%) Strand=Plus/Plus Query 368783 GAGTTGAAGGAGTTTTGGATTGCTGGTTTGAATCAGGTTCTATGCCTTATGG-TCAAATA 368841 || |||||| |||||| ||||| ||||||||||| ||||| |||||||||| || | || Sbjct 48510 GAATTGAAGAAGTTTTTGATTGTTGGTTTGAATCTGGTTCAATGCCTTATGCATCTATTA 48569 Query 368842 CATTATCCATTTGATAACGCAAAATACTTTGATAATGATAAAGATTATGTGGCTGATTTT 368901 ||||||||||||| || | ||| ||| | ||| | ||| || |||||||| Sbjct 48570 -ATTATCCATTTGAAAATAAAGAATTATTTAAAAAT-----ATATTTCCTG-CTGATTTT 48622 Query 368902 GTAACAGAATCAATTGATCAAACACGTGGTTGGTTTTATACCCTATTAGTATTATCCACA 368961 || ||| | | ||||||||| | || ||||||||||| || | |||||||| ||| Sbjct 48623 GTTGGTGAAGGATTAGATCAAACAAGAGGATGGTTTTATACTCTTATGGTATTATCTACA 48682 Query 368962 GCTATTTTCGATAAACCGGCTTTTAAAAATGTAATAGTAACTGGTATTGTTAATGCATCT 369021 || | || ||| |||| |||||||| ||| | ||||||| |||| | || ||||| Sbjct 48683 GCATTATTTGATCAACCAGCTTTTAAGAATATTATAGTAAATGGTTTAGTATTAGCATCA 48742 Query 369022 GATGGTCAAAAGATGTCAAAAAG--TAAGGGTAATTATTCCGATCC-TAATATTTTAATT 369078 |||||| |||| |||||||| || ||| |||||| | ||||| | | || || || Sbjct 48743 GATGGTAAAAAAATGTCAAAGAGATTAA--AAAATTATCCTGATCCATTAGATATT-GTT 48799 Query 369079 GATAAATTTGGTGCTGATACTTTGAGATTATACCTATTGTCATCACCTGTAGTAAAAGCA 369138 |||||| ||| || || |||| ||||||| || | ||||| ||||||| |||| Sbjct 48800 AATAAATATGGAGCAGACTCTTTAAGATTATTTTTAATTAATTCACCAGTAGTAAGAGCA 48859 Query 369139 GAATCTATTAAATTTGATGAA 369159 ||| || | | |||| | ||| Sbjct 48860 GAAACTTTAAGATTTAAAGAA 48880 >seq198 Length=90025 Score = 176 bits (194), Expect = 4e-38 Identities = 369/548 (67%), Gaps = 4/548 (1%) Strand=Plus/Plus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 || ||| ||||| |||||||| || || ||| ||||||||| ||| | ||||||| Sbjct 85027 AGTTATTGGTATTGATTTAGGTACTACTTATTCATGTGTTGGTATTTACAAGAATGGTAG 85086 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 ||| ||||||||| | ||||| ||||||||| | | ||| ||||||||||| || || || Sbjct 85087 AGTAGAAATTATTCCAAATGAACAAGGTAACCGTATTACACCATCTTATGTATCATTTAC 85146 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 || |||| ||| | ||||| |||| ||| | || || || ||||| | Sbjct 85147 TGATGATGAAAGATTAATCGGTGAGTCAGCTAAAAACCAGGCTACAATCAATCCGGTTCA 85206 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230 || | ||||||| || | | ||||| | |||| || ||| | || || Sbjct 85207 GACCTTGTTTGATGTAAAGAGACTTATTGGCCGTCGTTTCAAGGATGATTCCGTCCAAAA 85266 Query 550231 AGATATGAAGCATTGG--CCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAA 550288 |||| || ||||| || | ||||| ||||| | || ||||| ||| | Sbjct 85267 GGATAAGA--CATTGTTACCATATGAAATTATTAATAAAGAAAGTAAGCCTTACATTCAG 85324 Query 550289 GCTACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTA 550348 | ||| | |||| || || || | ||||| || |||| ||||||| || Sbjct 85325 GTTACAGTTAAAGGCGAGAAGAAGCAGTTAGCTCCAGAGGAAGTTTCTGCTATGGTCTTG 85384 Query 550349 ATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATA 550408 | || |||||| | | || |||| | | || | || || | | |||||||| Sbjct 85385 CTTAAGATGAAAGAGATTGCTGAAGCTTATCTCGGAAAGGAGGTAAAACACGCAGTAATT 85444 Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 ||||||||||| || |||||||| | ||||||||||| ||||| || ||||| ||| Sbjct 85445 ACTGTACCAGCTTACTTTAATGATGCTCAACGTCAAGCCACTAAGGACGCTGGTGCCATT 85504 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 ||||| | ||||| |||||||||| || ||||| || || || || |||| | ||| Sbjct 85505 GCTGGTTTGAATGTAATTCGTATTATTAACGAACCAACAGCAGCAGCTATTGCTTTTGGT 85564 Query 550529 CTTGATAA 550536 | ||||| Sbjct 85565 TTAGATAA 85572 >seq3 Length=57099 Score = 149 bits (164), Expect = 5e-30 Identities = 340/503 (68%), Gaps = 13/503 (3%) Strand=Plus/Minus Query 428102 CCGGTTCCAATTCCTTCTGTACCATTTACAAGAATCATTGGAATGACTGGTGCATAATAT 428161 || ||||| || || || |||||||| || |||||||||||||||| ||| ||||||| Sbjct 33194 CCTGTTCCTATACCATCAGTACCATTAACTAGAATCATTGGAATGATTGGAACATAATAC 33135 Query 428162 TGTGGTTCAATCATTTTATTATCTTCATAT-TGTAAATGTAAAATATCAAAATCATGCTC 428220 || |||||| || ||| |||||| |||| | ||| | | | |||| || Sbjct 33134 AAAGGCTCAATCTGTTGTCCATCATCATATAAGTAAGT-TAATAAAGGATCATCAGCTTC 33076 Query 428221 GATAAATAtttttttAGCCAATTCATCAAGTTGTGTAAAGATATATC---TTGCGCTTGC 428277 |||||| | | ||| | ||| | |||| ||||| ||||| | || ||||| Sbjct 33075 TGGAAATATATATCTAGTCCATTTAGATAGTTTAGTAAATATATAACGAGCAGCACTTGC 33016 Query 428278 GGAATCTTTACCTCCTGACATTCTAGTTCCAAATTGTCCATTAGGCATCAATAAATTAAT 428337 ||| || || ||| | ||||| | |||||||| ||| || |||||||| | Sbjct 33015 ---ATCCTTTCCACCTTCCTTTCTACTACCAAATTGACCACATGGTTCTAATAAATTTAG 32959 Query 428338 ATTATTACTTCCCACATAATTTTGGGCCATATTAACAATGGTACTAGTTAAGGATTGTTC 428397 |||||| ||||| ||| | ||||| |||||||| || || ||||| || || ||| Sbjct 32958 ATTATTGCTTCCAACAAAGTTTTGAGCCATATTTACTATAGTACTTTGTAGTGAAGATTC 32899 Query 428398 ACCATGATGATATTTAGTTCTTTTTGAAACTGCACCTTGTAATTCTGATACCTTTATTTC 428457 || |||||||| | | || | ||| ||| ||||| | ||||| | ||| Sbjct 32898 TCCGTGATGATAAGCACTATGTTCAGCAACATAACCAGCTAATTGTACAACCTTAAGTTC 32839 Query 428458 TTCTTTATAAATACCTTCTTCTACTGATCCATAAAATACTTTGCGTTGTGATGGTTTGAA 428517 || ||| | |||||| | || | || ||| ||| || | |||| ||||| || Sbjct 32838 --ATTATTAAGTTTCTTCTT-AAATGTTGCAAAAAGTACCTTTCTTTGTCCAGGTTTTAA 32782 Query 428518 TCCATCCATAATATTAGGTATAGATCTTAAATTATCATCCACTG-AGAATGATATTAGTT 428576 |||||| | | ||| || |||||||| | |||||| ||| ||| ||| |||| Sbjct 32781 TCCATCTAATAAATTTGGAATAGATCTAGTAGTATCAT-ATCTGCTAAATAATACAAGTT 32723 Query 428577 CTTGATGAATGAAATCATAATAT 428599 ||| ||| || |||||| ||||| Sbjct 32722 CTTTATGTATAAAATCAAAATAT 32700 >seq103 Length=16067 Score = 147 bits (162), Expect = 2e-29 Identities = 201/281 (72%), Gaps = 0/281 (0%) Strand=Plus/Minus Query 552303 GATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATC 552362 |||||||||||| ||||| | ||| | ||||| | || || || | ||| | ||| Sbjct 7422 GATGTTACTCCTTTATCTTTAGGTATTGAAACTTTGGGTGGAGTTTTTACTCGATTAATC 7363 Query 552363 GATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAAT 552422 ||||||||||||| || ||| || || || || |||||||| | |||| ||| Sbjct 7362 AATAGAAATACTACAATCCCTACCAAGAAGAGTCAAGTCTTTTCTACTGCTGCAGACAAT 7303 Query 552423 CAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAAT 552482 |||||| ||| ||| || |||| ||||||||||| | || || || ||||| Sbjct 7302 CAAACTCAAGTTGGAATCAAAGTTTTCCAAGGAGAAAGAGAGTTTGCTGCTGACAATAAG 7243 Query 552483 CAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATT 552542 |||||| ||| | | || |||||||| ||||| | ||||| || |||||| Sbjct 7242 TTACTTGGACAGTTTGAGATGATGGGAATTCCTCCAGCTCCAAGAGGAGTTCCTCAAATT 7183 Query 552543 GAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGT 552583 ||||||||||| ||||| ||||| |||||||| ||||||| Sbjct 7182 GAAGTTACTTTTGATATAGATGCAAATGGAATCATGAATGT 7142 >seq193 Length=106267 Score = 145 bits (160), Expect = 6e-29 Identities = 269/386 (70%), Gaps = 8/386 (2%) Strand=Plus/Plus Query 344255 TTTTATCTCCCACCATTTGTTTGAGACGTTGATAATATGTTGGACCAATGAATATTTTAA 344314 |||| || | ||||| ||||| | | |||||||| ||||| ||||| |||||| | Sbjct 13882 TTTTGTCATCAACCATATGTTTTAATCTCTGATAATAAGTTGGTCCAATAAATATTCTCG 13941 Query 344315 CTTCCATTCTTTGTCCCGTCATTCCATTATACATTGTTTCATTTCCCCATGCTTCATGTC 344374 || | ||| | |||||| ||||| |||||| ||||||||| | || | || Sbjct 13942 ACTCTAATCTCTTTCCCGTGTGGCCATTGTACATTACTTCATTTCCATTTTTTTGAAATC 14001 Query 344375 CTAAAGCTACTAAATCA-TCATTAATTTTATTAATATTAACTCCTGTAAATGGAGTTGCA 344433 | || ||| || | | | || | | || ||| | |||||| ||||| ||| Sbjct 14002 CAGAA-CTATGCAAACGGTTAGATATCTCTTCAACTGTAATTTTTGTAAAAGGAGTCGCA 14060 Query 344434 TCTCCATATACCCCTTTAATTGCACAAACTTTACCTAGTAAACATTCAATTAATTGACCT 344493 || || | | |||| ||||||||| ||||||| || | |||||||||||| || || Sbjct 14061 TCACCTTCCAATCCTTGAATTGCACATGCTTTACCAAGAAGACATTCAATTAAATGGCCA 14120 Query 344494 ATCGTCATACGTTTGGGCATACAATTAGGATTAATAATAATATCAGGAATTAATCCTGAT 344553 |||||||||||| || ||| || |||||| ||||||||||| |||| |||||| || Sbjct 14121 ATCGTCATACGTGAAGGAATAGCATGAGGATTCATAATAATATCCGGAA-TAATCC-CAT 14178 Query 344554 TTT--GTGAATGGAAGATCTGCA-CGATGAATTTTAAATCCAACTGTTCCTTTTTGTCCA 344610 || || || || | ||| || || || ||| | |||| ||| || ||||| ||| Sbjct 14179 CTTGAGTAAAAGGCATATCCTCAGTTCTGTATGTTATA-CCAATTGTACCCTTTTGGCCA 14237 Query 344611 GCTCTTGATGAGAATTTATCACCTAC 344636 ||| |||| |||||||| || || Sbjct 14238 TGTCTAGATGCAAATTTATCTCCGAC 14263 >seq183 Length=117400 Score = 122 bits (134), Expect = 7e-22 Identities = 137/181 (76%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 930654 AAAGTATTAATTGATTTTTCTTCACCAAATATTGCCAAAGAAATGCATATTGGACATTTG 930713 |||||| | ||||||||||| |||||||||||||| |||||||||||| | || |||||| Sbjct 96271 AAAGTAGTCATTGATTTTTCATCACCAAATATTGCAAAAGAAATGCATGTAGGGCATTTG 96212 Query 930714 CGTTCTACCATTATTGGAGAATCTTTATGTAGATTATATGAATATTGTGGAA-GTAAAGT 930772 | ||||| || ||||| || | ||| ||| | | ||||| | ||||| | | || Sbjct 96211 AGATCTACAATCATTGGTGATACAATATCTAGGATTTTGGAATACT-TGGAATTTGAGGT 96153 Query 930773 TCATCGAGTCAATCATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGCTTATAT 930832 | || | |||||| |||| |||||||| || |||||||| ||| | |||| ||| | Sbjct 96152 TTTAAGAATTAATCATGTTGGAGATTGGGGTACTCAATTTGGGATGCTTATTGAATATTT 96093 Query 930833 A 930833 | Sbjct 96092 A 96092 >seq69 Length=29286 Score = 113 bits (124), Expect = 4e-19 Identities = 137/185 (74%), Gaps = 4/185 (2%) Strand=Plus/Plus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 |||||||||||||| |||||| || ||||| | ||||||||| ||||| || || | Sbjct 9038 AATATTGTAATCAGATAGAGTCCTACCGTCTTCCAATTGTTTTCCAGCAAAGATCAGACG 9097 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 || |||||||| || || |||||||| |||||||| ||| |||||| |||||| || Sbjct 9098 CTGTTGATCAGGTGGGATACCTTCTTTGTCTTGAATCTTTGCTTTTACATTCTCAATAGT 9157 Query 563412 ATCAGTGTGAGTACA--TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATT 563469 || || || || ||| | || | || || ||||| | |||||| || ||||| Sbjct 9158 GTC--TGAAGGTTCAACTTCCAATGTGATGGTCTTCCCAGTTAAAGTTTTTACAAAAATC 9215 Query 563470 TGCAT 563474 ||||| Sbjct 9216 TGCAT 9220 >seq124 Length=102498 Score = 107 bits (118), Expect = 2e-17 Identities = 149/204 (73%), Gaps = 6/204 (3%) Strand=Plus/Minus Query 563274 AAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTT 563333 ||| | ||| | ||||| ||||||||||||| ||||||||| |||||| | ||| || Sbjct 26972 AAGTGGACTCTTTTTGG--ATATTGTAATCAGAAAGAGTTCTTCCATCTTCTAATTGCTT 26915 Query 563334 TCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTG 563393 || || || || | | ||| |||||||| |||||||| || ||||||||||| ||| Sbjct 26914 CCCTGCGAAGATTAAACGTTGTTGATCAGGTGGAATTCCCTCCTTATCTTGAATCTTTGC 26855 Query 563394 TTTTACTGCCTCAATTGTATCAGTGTGAGTACA--TTCGAGAGTAACAGTTTTACCAGTA 563451 || || ||||||||| || | || || || ||| | ||| | || || || || Sbjct 26854 CTTAACGTTCTCAATTGTGTCCG-ATG-GTTCAACTTCTAAAGTGATTGTCTTTCCTGTC 26797 Query 563452 AGAGTTTTAACGAAAATTTGCATA 563475 | ||||| || ||||| |||||| Sbjct 26796 AATGTTTTGACAAAAATCTGCATA 26773 Score = 105 bits (116), Expect = 5e-17 Identities = 137/186 (74%), Gaps = 4/186 (2%) Strand=Plus/Minus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 |||||||||||||| ||||||||| ||| || | ||| || || ||||| || | | Sbjct 26500 AATATTGTAATCAGAGAGAGTTCTTCCATCCTCTAATTGCTTCCCTGCAAAGATTAAACG 26441 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 || |||||||| ||||||||||| ||||| ||||| ||| ||||| |||||||| Sbjct 26440 CTGTTGATCAGGTGGAATTCCTTCCTTATCCTGAATCTTTGCCTTTACATTTTCAATTGT 26381 Query 563412 ATCAGTGTGAGTACA--TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATT 563469 || | || || || ||| | ||| | || || || || | ||| ||||| ||||| Sbjct 26380 GTCCG-ATG-GTTCAACTTCCAAAGTGATTGTCTTCCCTGTCAAAGTCTTAACAAAAATC 26323 Query 563470 TGCATA 563475 |||||| Sbjct 26322 TGCATA 26317 Score = 104 bits (114), Expect = 2e-16 Identities = 148/204 (73%), Gaps = 6/204 (3%) Strand=Plus/Minus Query 563274 AAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTT 563333 ||| | ||| | ||||| ||||||||||||| ||||||||| |||||| | ||| || Sbjct 26744 AAGTGGACTCTTTTTGG--ATATTGTAATCAGAAAGAGTTCTTCCATCTTCTAATTGCTT 26687 Query 563334 TCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTG 563393 || || || || | | ||| |||||||| |||||||| || ||||||||||| ||| Sbjct 26686 CCCCGCGAAGATTAAACGTTGTTGATCAGGTGGAATTCCCTCCTTATCTTGAATCTTTGC 26627 Query 563394 TTTTACTGCCTCAATTGTATCAGTGTGAGTACA--TTCGAGAGTAACAGTTTTACCAGTA 563451 ||||| |||||||| || | || || || || | ||| | || || || || Sbjct 26626 CTTTACATTTTCAATTGTGTCCG-ATG-GTTCAACCTCTAAAGTGATTGTCTTTCCCGTC 26569 Query 563452 AGAGTTTTAACGAAAATTTGCATA 563475 | ||||| || ||||| |||||| Sbjct 26568 AATGTTTTGACAAAAATCTGCATA 26545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029281403875240