Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20ubiquitum_20[genbank_20GCA_5F001865345.1_202016- 11-03] 39 sequences; 8,970,213 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq6 268 4e-66 seq1 230 9e-55 seq4 170 8e-37 seq13 134 5e-26 seq8 122 3e-22 seq38 116 1e-20 seq10 113 2e-19 seq30 98.7 4e-15 seq37 95.1 5e-14 seq3 91.5 6e-13 >seq6 Length=315766 Score = 268 bits (296), Expect = 4e-66 Identities = 1047/1616 (65%), Gaps = 65/1616 (4%) Strand=Plus/Minus Query 450913 AGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAA 450972 ||| ||||| |||||| | || ||||| | || ||||| ||||| | ||||| | Sbjct 111900 AGCTATTGGTATTGATTTAGGTACCACATACTCGTGTGTTGGTGTATGGAGAAATGATAC 111841 Query 450973 TGTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTAC 451032 ||||| ||| | ||||||| ||||| || || || || |||| ||| ||||| Sbjct 111840 AGTAGATATTGTTCCAAATGATCAAGGTAACCGTACAACACCATCATATGTAGCATTTAC 111781 Query 451033 GGATTCAGAAAGACTTTTAGGGCAAGCTGCTAA--ATCAATGGTAAATTCAAATGCCAAA 451090 || | || | || | || | || || || | ||| || | |||| | | Sbjct 111780 AGAGACTGAGCGTCTCATTGGAGATGCAGCAAAGAACCAA--GTTGCTAGAAATCCAGAT 111723 Query 451091 AACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAA 451150 || ||||| | ||||||||||||| | ||||| | | | ||| || | | || ||| Sbjct 111722 AATACAGTCTTTGATGCTAAACGTCTTATTGGTAGAAAATTTGACGACCAGGCAGTGCAA 111663 Query 451151 AAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAAT---CAAAAAGGAAAGCCCTATATT 451207 | || | | || | | | | |||| | | ||||| || || |||| Sbjct 111662 AGTGATATGACTCACTGGCCATTTAAAATAGTTAGAGGCCCAAAAGACAAACCAATTATT 111603 Query 451208 CAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTT 451267 |||| |||| |||||| | || || | ||||||||||||| |||||||| Sbjct 111602 AGTGTAAGTTATTTAGGTGAGAAGAAGGAATTCCATGCTGAAGAAATTTCTGCTATGGTT 111543 Query 451268 CTTACTAAA-ATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGT 451326 |||| ||| ||||| || | | ||| ||| | || ||| ||| |||| || Sbjct 111542 -TTACAAAAGATGAAGGAGATTTCTGAAGCATACTTGGGACGCCCAATTAAGAATGCCGT 111484 Query 451327 AATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACA 451386 | ||||||| || |||||||||||||| | ||||| ||||||||||| |||||||| Sbjct 111483 AGTTACTGTACCAGCTTATTTCAATGACTCTCAACGTCAAGCAACTAAGGATGCAGGTGC 111424 Query 451387 TATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATA 451446 ||||||||||||||||| | |||||||||| ||||| ||||| || ||| | || || Sbjct 111423 AATTGCTGGTTTAAATGTAATGAGAATTATTAACGAACCAACAGCCGCAGCTATTGCTTA 111364 Query 451447 TGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGG 451506 ||| || | || || | ||| | || | |||| |||| | || ||||| ||||| Sbjct 111363 TGGTCTTGATAA---GAAGGGAACTGGTGAGAGAAATGTTTTGATCTTCGATTTGGGTGG 111307 Query 451507 AGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAAC 451566 || || |||| || || | | ||||| ||||| | ||||| || ||||| || Sbjct 111306 TGGTACATTTGATGTATCATTATTAACTATTGAGGATGGTATCTTTGAGGTTAAGGCTAC 111247 Query 451567 CAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCAATTGTGGAATGGTTGAA 451626 |||||||||||| |||| ||||||||| ||||||| | |||| |||| ||| Sbjct 111246 TGCTGGTGATACTCACTTAGGTGGTGAAGATTTTGATAACAGACTTGTAGAAT-TTTGCG 111188 Query 451627 AAC-TGATGTTCAACGAAA-ACTAAAAGTA--GATATTTCTACTAACCAAAAAGCACTTA 451682 || || || | |||| | || | ||| ||| | |||| || | ||| | | Sbjct 111187 TACAAGACTTTAAGAGAAAGAATAGAGGTATGGATTTAACTACAAATGCCAGAGCTTTAA 111128 Query 451683 GACGTCTTAAAACATCAGCAGAA-----AAAGCTAAAATTACACTCAGTTCAACACAAAC 451737 || | | | ||| | ||| |||| || ||| || |||||| ||| | Sbjct 111127 GAAGATTAAGAACTCAATGTGAACGTGCAAAGAGAACTTTATCATC--TTCAACTCAAGC 111070 Query 451738 TACTAGTATAAACATTGAT--AGTTTAGTTGATGGAATGGATTATGCTACTACTCTTACC 451795 ||| ||| | | ||| | |||| ||| || || |||||| | | | | ||| Sbjct 111069 TAC---TATTGAGTTGGATTCACTTTA--TGAAGGTATTGATTATTCAATTGCCATTAGT 111015 Query 451796 CGTGCTAAATTTGAATCAATTTGTTCCAGTATTTTTGCACGGGTAA---TGAAACCTGTT 451852 | |||| ||||||| | | ||| | ||| | | || | || | || ||| Sbjct 111014 AGAGCTAGATTTGAAGAACTCTGTGC--TGATTACTTC-CGTGCAACTTTAGCTCCAGTT 110958 Query 451853 GATCAAGTATTACATGATTCTAAAAT-TAGTAAAGATAAAATTGATGAAATTGTGCTTGT 451911 || ||||| | | ||| || || | |||||| | |||| |||| | || Sbjct 110957 GAGAAAGTACTCAAGGATGCTGGTATGGACAAAAGAT-CTGTACATGATGTTGTTTTGGT 110899 Query 451912 AGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTT----GTCTTCTTATTTTGGAG 451967 || |||||||| || ||||| || | |||| || | | ||| ||| | Sbjct 110898 TGGTGGTTCTACTCGTATTCCAAAGGTCCAAGCCTTGATTCAGGAATTC----TTTAATG 110843 Query 451968 GAAAACAACTATGTAAGAGC-GTAAATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTT 452026 |||| | | ||| || ||| | || || |||||||||||||| ||||||||||| || Sbjct 110842 GAAAGGAGCCATGCAA-AGCAATTAACCCAGATGAAGCTGTTGCCTATGGTGCTGCTGTA 110784 Query 452027 CAAGCAGCTATTCTAACAGGT------TCAGATGATGAAAAATTAGGAGATATTCTGTTA 452080 ||||| ||||| ||| ||| || || || | || ||| | ||||| Sbjct 110783 CAAGCTGCTATCTTAAATGGTGAGCAATCTTCTGCTG----TTCAG--GATCTCTTGTTA 110730 Query 452081 GTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATGACTAATTTA 452140 ||||||| | || |||| ||||| | ||||| |||||||| | |||||||| | Sbjct 110729 TTAGATGTTGCTCCATTATCACTTGGTTTGGAAACTGCTGGTGGTGTTATGACTAAGCTT 110670 Query 452141 ATTAAACGAGGAACTTCTATTCCTTGTAAAAAGAGTCAAACATTTAGTACAGCAAGTGAT 452200 ||| | || || |||| || ||||||| ||| |||| || ||| Sbjct 110669 ATTGAGCGTAACACAACTATCCCAGCCAAAAAGACACAAGTCTTTACCACTTATGCCGAT 110610 Query 452201 AACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATGACACGAGATAAT 452260 |||||| |||||| |||||||| | |||||| ||| | || ||||| ||||| Sbjct 110609 AACCAAAGCGGTGTATTAATTCAAGTCTATGAAGGTGAAAGAGCCATGACTAAGGATAAC 110550 Query 452261 AATAAACTAGGAGAATTTACTCTTTCA-AACATTCCTCCTATGCCAAGGGGAACTCCTCA 452319 | || ||| || || | | || | ||||| || ||||| || || || Sbjct 110549 CACCTTCTTGGA-AAGTTCCACCTTGATGGTATTCCACCAGCACCAAGAGGTGTACCACA 110491 Query 452320 AATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGTGCAGTTGA-AA 452378 |||||| | || | |||| ||||||| ||||||||| | || || || || || || Sbjct 110490 AATTGAGGTCACTTTTGATATTGATGCTAATGGTATTTTGAACGTATCCGCTGTCGATAA 110431 Query 452379 AATCATCTGGAAAATCAGAAAAAATTACAATTACTAATGATAAAAACCGTTTATCTAAAG 452438 | | | | |||| || || || ||||||||||| ||||| | ||||| || | Sbjct 110430 GAGTACCGGTAAAAGTAG-CAAGATCACAATTACTAACGATAAGGGTAGATTATCAAAGG 110372 Query 452439 AAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGATGATGAACAA 452494 | ||||| ||| ||||| |||| || || |||| ||||| ||| ||||||||| Sbjct 110371 ATGATATCGAACGTATGGTTAATGATGCTGAGAAATACAAGGGTGAGGATGAACAA 110316 >seq1 Length=677778 Score = 230 bits (254), Expect = 9e-55 Identities = 464/683 (68%), Gaps = 13/683 (2%) Strand=Plus/Plus Query 450917 ATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTA 450976 ||||| |||||| | || || || | ||||||||| ||| ||||| | ||||| | ||| Sbjct 84043 ATTGGTATTGATTTAGGTACTACTTATTCATGTGTTGGTATTTACAAGAATGGTAGAGTA 84102 Query 450977 GAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACGGAT 451036 |||||||| ||||||| ||||| || | ||| || || | ||| ||||| ||| Sbjct 84103 GAAATTATTCCAAATGAACAAGGTAACCGTATTACACCATCTTATGTATCATTTACTGAT 84162 Query 451037 TCAGAAAGACTTTTAGGGCAAGCTGCTAAAT-CAATGGTAAATTCAAATGCCAAAAACAC 451095 |||||| | | || | | |||||| | | | || | |||| | | | || Sbjct 84163 GATGAAAGATTAATCGGTGAGTCAGCTAAAAACCAGGCTACAATCAA-TCCGGTTCAGAC 84221 Query 451096 AGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAAAAGA 451155 | | ||||| || | | ||||||||| | | |||||| | || ||||| || Sbjct 84222 CTTGTTTGATGTAAAGAGACTTATTGGCCGTCGTTTCAAGGATGATTCCGTCCAAAAGGA 84281 Query 451156 GAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAAGTAAA 451215 || | ||| || | ||||| | | ||| || || | ||||| || ||||| || | Sbjct 84282 TAAGACATTGTTACCATATGAAATTATTAATAAAGAAAGTAAGCCTTACATTCAGGTTAC 84341 Query 451216 TTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAA 451275 |||||| || | || || ||||| || ||| |||| ||||||| ||| || | Sbjct 84342 AGTTAAAGGCGAGAAGAAGCAGTTAGCTCCAGAGGAAGTTTCTGCTATGGT-CTTGCTTA 84400 Query 451276 A-ATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTG 451334 | |||||||| | || ||| ||| | || || | | ||||||||||||| Sbjct 84401 AGATGAAAGAGATTGCTGAAGCTTATCTCGGAAAGGAGGTAAAACACGCAGTAATTACTG 84460 Query 451335 TTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTG 451394 | || ||||| || |||||||| ||||| ||||| ||||| || || || ||||||| Sbjct 84461 TACCAGCTTACTTTAATGATGCTCAACGTCAAGCCACTAAGGACGCTGGTGCCATTGCTG 84520 Query 451395 GTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAG 451454 |||| ||||| |||| |||||||| ||||| |||||||| ||| | || | ||| ||| Sbjct 84521 GTTTGAATGTAATTCGTATTATTAACGAACCAACAGCAGCAGCTATTGCTTTTGGTTTAG 84580 Query 451455 GAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTC 451514 | ||||| | || || | || || || | |||||| ||||| || ||| Sbjct 84581 -------ATAAGAA--GGCTGAGAAGAGCATCTTGGTGTATGATTTGGGTGGTGGTACTT 84631 Query 451515 ATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTG 451574 |||| ||| | | | ||||| |||| ||||||||||| || || | ||||| Sbjct 84632 TTGATGTTTCACTCTTGACCATTGATAATGGTGTATTTGAAGTCGTTGCCACAAGTGGTG 84691 Query 451575 ATACTCATCTAGGAGGTGAAGAT 451597 |||| ||| |||||||||| ||| Sbjct 84692 ATACCCATTTAGGAGGTGAGGAT 84714 Score = 131 bits (144), Expect = 7e-25 Identities = 290/432 (67%), Gaps = 11/432 (3%) Strand=Plus/Plus Query 451991 AATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCA 452050 || || |||||||| ||||| ||||||||||| || ||||| | ||| || |||| Sbjct 85108 AACCCAGATGAAGCCGTTGCCTATGGTGCTGCTGTACAAGCCGGTATATTAGCAGGC--- 85164 Query 452051 GATGATGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTT 452110 || | || | | ||| | || ||| | ||||| || ||| | || | || || Sbjct 85165 GAGGGTGGTA------GTGATTTACTATTATTGGATGTTACTCCTTTGACTTTGGGTATT 85218 Query 452111 GAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTTCTATTCCTTGTAAA 452170 || || | ||||||| | ||||| || | ||| || || | |||| ||| Sbjct 85219 GAGACTGTTGGTGGAGTTATGACCAAGCTCATTGGTAGAAACACAGTTGTTCCAACCAAA 85278 Query 452171 AAGAGTCAAACATTTAGTACAG-CAAGTGATAACCAACCAGGTGTAACTATTCAAGTGTT 452229 ||||| || || ||||| | || ||||||||||||| ||| |||||| || | Sbjct 85279 AAGAGCCAGGTTTTCAGTACTTACCAG-GATAACCAACCAGCCGTACTTATTCAGGTTTA 85337 Query 452230 TGAAGGAGAACGTGCAATGACACGAGATAATAATAAACTAGGAGAATTTACTCTTTCAAA 452289 ||| || |||||| ||||||| || || || ||| ||| | ||| ||||| Sbjct 85338 TGAGGGCGAACGTCCAATGACCAAGGACAACAACCTACTCGGAAAGTTTGAGCTTTCTGG 85397 Query 452290 CATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATGCAAA 452349 |||||||| ||||| || |||||| ||||| |||||| ||| ||||| | | Sbjct 85398 AATTCCTCCAGCTCCAAGAGGTGTTCCTCAGATTGAGGTTACCTTTGAGATTGATACTGA 85457 Query 452350 TGGTATTCTTAATGTGAGTGCAGTTGAAAAATCATCTGGAAAATCAGAAAAAATTACAAT 452409 |||||| | | || |||||| || ||| |||| ||||| || || ||||| || Sbjct 85458 CGGTATTTTACAAGTCAGTGCAAAAGATAAAGGTACTGGTAAATCTGAGAAGATTACTAT 85517 Query 452410 TACTAATGATAA 452421 || |||||||| Sbjct 85518 CACAAATGATAA 85529 Score = 120 bits (132), Expect = 1e-21 Identities = 161/224 (72%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || ||||| | ||||| || || || || | || |||||| | || Sbjct 543090 ATGCAGATTTTTGTAAAAACTTTAACTGGGAAGACCATCACATTGGAAGTTGAACCTTCA 543031 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||| | | ||| ||| |||||||| || ||||| || || ||||||||| Sbjct 543030 GACACTATTGAGAATGTAAAAGCAAAGATTCAAGACAAAGAAGGTATCCCACCTGATCAA 542971 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || || | || |||||| | ||||| || || ||| | | ||||| ||| Sbjct 542970 CAGCGTCTGATCTTTGCTGGAAAACAATTGGAAGACGGTAGGACTCTATCTGATTACAAT 542911 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | ||||| | || | ||||| ||||| ||||| ||||| Sbjct 542910 ATTCAAAAGGAGTCTACTTTGCACTTGGTATTGAGACTAAGAGG 542867 >seq4 Length=775478 Score = 170 bits (188), Expect = 8e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 391047 ATAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCA 391106 || ||| | ||||| ||||| || |||| || || || || ||| | || |||||| || Sbjct 280719 ATTATGCAGATTTTTGTTAAGACTTTGACAGGAAAGACAATCACTTTGGAAGTTGAACCA 280778 Query 391107 TCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGAT 391166 || || | |||||| | | || ||| ||||||||||||||||||||||| |||||| Sbjct 280779 TCGGACACAATTGAAAATGTAAAGGCAAAGATTCAAGATAAGGAAGGAATTCCACCTGAT 280838 Query 391167 CAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTAT 391226 ||||| |||||||| || ||||||| ||| | || |||||||||||| | | ||||| Sbjct 280839 CAACAGCGTTTAATCTTTGCAGGGAAGCAATTAGAGGATGGAAGAACTCTCTCTGATTAC 280898 Query 391227 AATATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 |||||| | ||||| | || | || ||||| |||||||| ||||| Sbjct 280899 AATATTCAAAAGGAGTCCACTTTGCATTTAGTCTTAAGACTCAGAGG 280945 Score = 165 bits (182), Expect = 3e-35 Identities = 171/224 (76%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || |||||| |||| || || || || ||| | || |||||| |||| Sbjct 281177 ATGCAGATTTTTGTCAAAACATTGACAGGAAAGACAATCACTTTAGAAGTTGAACCATCG 281236 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||| |||| ||| |||||||||||||| |||||||| ||||||||| Sbjct 281237 GACACAATTGAGAACGTTAAGGCAAAGATTCAAGATAAGGAGGGAATTCCACCTGATCAA 281296 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||||||||||| ||| ||||||| ||| | ||||||||||||||| | | ||||| ||| Sbjct 281297 CAACGTTTAATCTTCGCAGGGAAGCAATTAGAAGATGGAAGAACTCTTTCTGATTACAAT 281356 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | || || | || | || || ||||| ||||| ||||| Sbjct 281357 ATCCAAAAAGAGTCCACTTTACATTTGGTATTGAGACTTAGAGG 281400 >seq13 Length=714223 Score = 134 bits (148), Expect = 5e-26 Identities = 284/420 (68%), Gaps = 9/420 (2%) Strand=Plus/Minus Query 364565 TATTCCATCTTTAGTTGATGGATTTAAACCTTCTCAAAGAAAAATTTTTTATGGAGCAAA 364624 ||||||| |||| | |||||||| |||||| |||||||| | ||| || | || Sbjct 710269 TATTCCAAATTTATTAGATGGATTAAAACCTGGACAAAGAAAGGTACTTTTTGCAACA-- 710212 Query 364625 TTTAAGAGGATTAGAAAAAGATCAAGTAAAAGTAGCTCAATTAGCAGGTTTTGTATCTGA 364684 ||||||| || || | || || | || || | |||||||| |||| ||| |||| Sbjct 710211 TTTAAGAAGAAACTTAATA-ATGAACTTAAGGTTGTACAATTAGCTGGTTATGTTGCTGA 710153 Query 364685 CCGGGTAGCTTATCATCACGGTGAGGCAAGTTTAATGGGAGCAATAATTGGAATGGCACA 364744 | |||||||||||||| || | || | | ||| | ||||| || Sbjct 710152 ACATAGTGCTTATCATCACGGAGAATCTTCACTACAAAGTACTATAGTAAATATGGCTCA 710093 Query 364745 AAATTTTGTTGGAAGTAATAATGTAAATTTACTAGAACCAAAAGGACAATTTGGAAGTCG 364804 ||| ||||||||||| |||||| |||||||| |||||||| || |||||||| ||| | Sbjct 710092 AAACTTTGTTGGAAGCAATAATCTAAATTTATTAGAACCATGTGGTCAATTTGGTAGTAG 710033 Query 364805 AGTAATGGGAGGTAAAGATTCTGCCAG---CCCACGTTATATTTGGACCAAACTTGAAAA 364861 || || |||| | | ||| || | |||||||| | || ||||| || Sbjct 710032 ---AAAGGAAGGTGGAAAGGATGCAAGTGCTGCTCGTTATATATTTACTAAACTATCTAA 709976 Query 364862 AGTGGCAGGATTAATATTTAGAAAAGAAGATAATCCAATTTTAAATTATATTAATGATGA 364921 | | | ||| |||||| | ||| ||| |||| | |||| ||| | ||||||| Sbjct 709975 ATGGACTAGATATATATTTCCAGAAGCTGATGATCCTTTATTAACTTACTTATATGATGA 709916 Query 364922 TGGATTAATGGTTGAACCTGAATTTTATCTTCCTATTATTCCTATGATTTTAGTAAATGG 364981 |||| | | |||| ||| | |||| |||| || ||||| |||||| |||| ||||| Sbjct 709915 TGGACAACAGATTGAGCCTTTGTATTATGTTCCAATCATTCCAATGATTCTAGTTAATGG 709856 Score = 118 bits (130), Expect = 4e-21 Identities = 390/592 (66%), Gaps = 32/592 (5%) Strand=Plus/Minus Query 363743 AGGAATTCCTAAACTAGAAGATGCTAATAAAGCAGGAACAAAAGATGCTCATAAATGTGG 363802 |||||| || ||| |||| ||||| ||| ||||||| | | || | |||||| Sbjct 711079 AGGAATCCCAAAATTAGAGGATGCAAATGAAGCAGGTGGACCTCACTCTAAGAAATGTAC 711020 Query 363803 ATTA-TATTTAGCAGAGGGAGATTCTGCTCT---TTCTATGATTCTGTCAGGGTTATCAA 363858 || || ||| | || ||||||||||| |||| || || | |||| | |||| Sbjct 711019 TCTAATACTTA-CTGAAGGAGATTCTGCAAAAACTTCT-TGTTT--GGCAGGACTTTCAA 710964 Query 363859 GTAAAGATAGAAATTTTTATGGTGCCTTTCCGTTAAAAGGAAAATTATTAAATGTAAGAG 363918 | || |||| | | || ||||| ||||| || |||||| | |||||||| |||| Sbjct 710963 TTGTAGGTAGAGACTATTTTGGTGTATTTCCACTACGTGGAAAACTTTTAAATGTTAGAG 710904 Query 363919 AAGCATCAGTTAAACAAATTATGGGAAATGATGAGATATCAAACCTTaaaaaaaTTTTAG 363978 |||| ||| |||||||| || || |||| ||| ||| ||| || ||||| || | Sbjct 710903 AAGCTTCATTTAAACAACAAATTGGTAATGTTGAAATACAAAATATTCTTAAAATATTGG 710844 Query 363979 GATTACGTAATGAATTTAAATATGAAATGGATGAAGAATTTAATACTTTAAGATATGGAA 364038 ||||| ||| || | || ||||| | ||| | | |||| ||||| |||||| Sbjct 710843 GATTAGGTATTGGACAAAAGTATGATA---ATGGACCAGTTAAC---TTAAGGTATGGAT 710790 Query 364039 AAGTAATAATTTTATGTGATTCAGATGTAGATGGAAGTCATATTAAGGGACTAATTTTAA 364098 |||| | | ||| |||| ||||| ||||||||||| || ||||| | | Sbjct 710789 CTTTAATGCTAATGACAGATCAAGATCATGATGGGAGTCATATTAAAGGGCTAATAATTA 710730 Query 364099 ATATGTTTCATAGTATGTGGCCTAATCTT--TTAAAAAGAGAAGGTTTTATTACAACTA- 364155 | || | ||| | ||||| || ||| || | || ||||||| ||| ||| | Sbjct 710729 ACTTGATACATTATTACTGGCC-AAGCTTAATTCACTTTAG-AGGTTTT-TTAAAACAAT 710673 Query 364156 TGAACACTCCAATTGTTAAAGCAACAAAAGG---AAAAGAAATATTAAAATTTTATAATT 364212 | |||||||||||||| || | ||||| ||| ||||| | ||| | || | Sbjct 710672 TTGTTACTCCAATTGTTAAGGCGAAGAAAGGGCAAAACGAAATTT---CATTCTTTACTC 710616 Query 364213 TAACTGATTATGATAATTGGAGAAATGATAATAATACAAAA------GGATATTATATTA 364266 | ||| ||||| | |||||||| ||||| ||||| |||| | | | Sbjct 710615 TGTATGAATATGAACAATGGAGAAAGAATAATTCATCAAAATTAACTGGATGGAAGTTCA 710556 Query 364267 AATATTACAAAGGATTAGGAACATCTGATTCTAAAGAAGCTAAAGAATATTT 364318 |||| || ||||| ||||| || ||| | | ||| |||||||||||| Sbjct 710555 AATACTATAAAGGTTTAGGTACTTCTACTGATCTTGAATTTAAAGAATATTT 710504 >seq8 Length=503272 Score = 122 bits (134), Expect = 3e-22 Identities = 202/287 (70%), Gaps = 15/287 (5%) Strand=Plus/Minus Query 451320 ATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATG 451379 |||| || || ||||| || ||||| || |||||| | ||||| ||||||||||| || | Sbjct 272726 ATGCCGTTATCACTGTACCAGCTTACTTTAATGATTCTCAACGACAAGCAACTAAGGACG 272667 Query 451380 CAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTC 451439 | || ||| || || ||||||||| | || ||||| || || |||||||| || Sbjct 272666 CTGGCTCTATAGCAGGCTTAAATGTTACAAGGATCATTAACGAGCCAACAGCAGCAGCCT 272607 Query 451440 TAGCATATGGACTAGGAAAATCAAAAGAAACAGAAG--aaaaaaaTATTTTAGTATTTGA 451497 ||||||||||| | ||| | || | || | || | |||| | || | ||| Sbjct 272606 TAGCATATGGAAT-GGAGA--------AAGCTGATGGCAAGACAATAGCT--GTTTATGA 272558 Query 451498 TTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCA-ATTGAAGATGGGGTATTTGAAG 451556 || || ||||| || ||| | |||| | ||| | ||| || || || ||||||| Sbjct 272557 CTTGGGAGGAGGTACCTTTGACATTTCTAT-CTTAGAGATTCTAGGGGGAGTTTTTGAAG 272499 Query 451557 TAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGAT 451603 | |||||||| ||||| ||||| || |||||||| ||| ||||| Sbjct 272498 TGAAGGCAACAAATGGAAATACTTCACTCGGAGGTGAGGATTTTGAT 272452 >seq38 Length=154672 Score = 116 bits (128), Expect = 1e-20 Identities = 194/278 (70%), Gaps = 7/278 (3%) Strand=Plus/Minus Query 96026 GAATAATTAGTTTTAAATTGATATGCAATTTGTGGCACTAGGGGATCGTCAGGATTTGGG 96085 ||||||| | |||| || || |||||| | ||| || | ||||||| ||| | || Sbjct 4753 GAATAATCATTTTTGTATAGAGATGCAACTAGTGCATCTTGAGGATCGTTAGGTTCAGGA 4694 Query 96086 TCAGCCAATAAACTGCAT--AAGGATAAAAGTACTTTACTAATGTTTAATGCTGGGCTCC 96143 || | ||| ||| | | ||| | | ||| | |||| | ||||| || |||| Sbjct 4693 GAAGAGAGTAA--TGCTTGGATGGAAAGCATTACGGTTCTAAGAGTCAATGCAGGACTCC 4636 Query 96144 AGTTATTTTTTAAAATATCTAAACAAATTGCACCTGT---AGTACTAATATTTGGATGAT 96200 || || |||||||||||||| ||||| || || || | || ||| |||||||| Sbjct 4635 AGGCATCTTTTAAAATATCTAGGCAAATAGCTCCAGTTTGACTAGAAATGTTTGGATGCC 4576 Query 96201 AAATAGGAGTTTTAAATATAATTTTAGGAGGCTTATATGGATAGTCTTCAGGAAAAGTAA 96260 |||| || ||||| | | ||| || || | ||||||||| |||| |||| | | | Sbjct 4575 AAATTTTTGTAATAAATTTGACTTTTGGGGGTTCATATGGATATTCTTTTGGAACAATTA 4516 Query 96261 TTTCTAATTGGAATACTCCACCCTCATAGGGTGTTCCT 96298 | || | ||| |||||||| |||||||| ||||||||| Sbjct 4515 TATCGAGTTGAAATACTCCCCCCTCATATGGTGTTCCT 4478 >seq10 Length=227057 Score = 113 bits (124), Expect = 2e-19 Identities = 243/354 (69%), Gaps = 17/354 (5%) Strand=Plus/Minus Query 412289 TTCCAAAACGACCACTTCTACCAATTCTATGTATAAAAGTTTCATGATTTTTAGGTAAAT 412348 ||||||| | ||| ||||| ||||||||||| ||| | ||| | ||| |||||| | Sbjct 211787 TTCCAAATCTACCGCTTCTTCCAATTCTATGAATATATAATTCTTTATTAGTAGGTAGGT 211728 Query 412349 CATAATTTATAACTAATTTAACCTCAGGAATATCTATCCCCCGTGCTAATAAATCAGTTG 412408 | ||||| | || || ||||| | | | ||| ||||| | | | ||||||| |||| Sbjct 211727 CGTAATTAACGACCAAATTAACTTGTTGCACATCAATCCCTCTTCCCCATAAATCTGTTG 211668 Query 412409 TTAATAAAATTCGTGTTTTTCCCTCTCTAAATTCATCTACAATTTTACTTCTTTCTT--C 412466 ||| ||||| || |||||||| ||||||||||| ||| ||| || ||||| | | Sbjct 211667 TTATTAAAACCCGAGTTTTTCCTTCTCTAAATTC-TCT-CAAGATTTCTTCTCTAGTAAT 211610 Query 412467 TTGTTCTAAACCTCCATG---AATTGTTGTAGTTGGAAATCCTTCCTCTTCTAACTTATT 412523 |||| | ||||||| || | | || ||||| ||| | || ||| || Sbjct 211609 TTGTGGAAGTTCTCCATGCACAAAAGATACCGT--GAAATGATTCTCCATCATTCTT-TT 211553 Query 412524 TTTAACAAATTCTATTTTATTAATTGAATTACAAAAAATCATTGTATGAG--ATGTTGAA 412581 ||| |||||| |||||| ||| ||||||||||| || | |||| | | || Sbjct 211552 ACTAAGCCATTCTACTTTATTCCTTGTGTTACAAAAAATAATAGATTGAGTAACAGTCAA 211493 Query 412582 ATTATTTGGTATAAATCTAATAAAGTATCAAATTT---ATATTCTTCTTCTACT 412632 | || | |||||||| ||||||| |||||||| | ||| || |||||| Sbjct 211492 AGTA--TCATATAAATCGCATAAAGTTTCAAATTTCCACTTTTCCTCCTCTACT 211441 >seq30 Length=890313 Score = 98.7 bits (108), Expect = 4e-15 Identities = 149/209 (71%), Gaps = 10/209 (5%) Strand=Plus/Plus Query 502394 AATGCCAACAGCATCTACATCTCAACTATTAGGCAATTATGAATCATTTGAACCATTTAC 502453 |||||| || || ||||| || ||| ||||||| || | ||| |||||||||||||| Sbjct 426106 AATGCCTACTGCGTCTACCTCGCAAATATTAGGTAACAACGAAAGTTTTGAACCATTTAC 426165 Query 502454 TTCTAATATATATACTAGAA--GAACTTTAGCAGGTGAATTTATAGTTGTTAATAAACAT 502511 ||| ||||||||| | | | | ||||| | ||||||||| | || || ||| ||| Sbjct 426166 TTCAAATATATATCATCGTAGGGTACTTT--CTGGTGAATTTTTTGTAGTGAATCCTCAT 426223 Query 502512 TTAATAAATGATTTGAATGAAATCGGTGAATGGACTAATGAAA---TTAGACAAAAAGTA 502568 ||| | ||||| ||| |||| | || |||| |||| | ||| |||||| | Sbjct 426224 TTACTCAATGACTTGCTTGAACTTGGGCTATGG---GATGACAGGCTTAAACAAAATATC 426280 Query 502569 ATTAATGATAATGGTTCTATTCAAAATAT 502597 ||| ||||||| |||||||||||| Sbjct 426281 ATTGCAAATAATGGAAGTATTCAAAATAT 426309 >seq37 Length=532062 Score = 95.1 bits (104), Expect = 5e-14 Identities = 97/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 393021 GACTAGAATGGAATGATTATTTTATATCAATTGCTATTTTAACATCTTTAAGATCAACCT 393080 ||| | | ||| |||| |||||||| |||||| | || ||||| |||||| | | Sbjct 276713 GACCAAACTGGGATGAATATTTTATGAAAATTGCCAAAATAGCATCTCAAAGATCTAATT 276772 Query 393081 CTATTaaaaaaaaaGTAGGATGTGTTATTGTTAAAAATAAAAGAATTATTGCTACAGGAT 393140 ||||| || |||||| |||| || |||||||||||||||| ||||||| |||||| | Sbjct 276773 GTATTACAAGAAAAGTCGGATCAGTAATTGTTAAAAATAAAAAAATTATTAGTACAGGGT 276832 Query 393141 ATAATGG 393147 | ||||| Sbjct 276833 ACAATGG 276839 >seq3 Length=862862 Score = 91.5 bits (100), Expect = 6e-13 Identities = 165/237 (70%), Gaps = 6/237 (3%) Strand=Plus/Minus Query 437615 GTGTCGTATAATTGGCTTAACACTTGAAACACGACCTGATTTTATTACTCCGAAAGAAAT 437674 |||| | ||||| || |||||| | |||||| |||| |||| || || | | ||||| Sbjct 540014 GTGTAGAATAATAGGGTTAACATTAGAAACAAGACCGGATTACATCACACTAGACGAAAT 539955 Query 437675 --TACAATTCTTCGAAGTTATGGATGTACCAGAGTACAACTTGGAATTCAACATATCAAT 437732 | | ||| ||| || |||||||| ||||| || || ||||||||||||| || Sbjct 539954 ACTCCGATTAAGAGAATTT--GGATGTACTAGAGTCCAGCTCGGAATTCAACATACTGAT 539897 Query 437733 GATGATATTTTGAATTACATTAATCGAGGGTG-TAAACACAGTAAGTCAGTGAGAGCAAT 437791 || |||| || ||||||| |||| || || | || | || | | |||| Sbjct 539896 TATTGGGTTTTAAAACTCATTAATAGAGGTTGCTATTTGCGACAAATT-GTTAAATCAAT 539838 Query 437792 CAAACTACTTAAAAATGCTGGTTTTAAGGTGGATATTCATTTGATGCCAGATTTGCC 437848 | | |||||||| || | || | ||| || |||||||| || ||||||||||| || Sbjct 539837 TAGATTACTTAAAGATACAGGGTATAAAGTTGATATTCACTTAATGCCAGATTTACC 539781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975717412758212