Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20ubiquitum_20[genbank_20GCA_5F001865345.1_202016- 11-03] 39 sequences; 8,970,213 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq6 262 3e-64 seq8 199 3e-45 seq1 176 4e-38 seq13 149 5e-30 seq10 145 6e-29 seq4 122 7e-22 >seq6 Length=315766 Score = 262 bits (290), Expect = 3e-64 Identities = 572/847 (68%), Gaps = 21/847 (2%) Strand=Plus/Minus Query 551749 TATCTCTCGAAGATGGTCTCTTTTCTGTATTAGCTACTAGTGGAGATTCTCATCTTGGTG 551808 || || | || |||||| ||||| || |||||| ||| ||| |||| | |||| Sbjct 111283 TAACTATTGAGGATGGTATCTTTGAGGTTAAGGCTACTGCTGGTGATACTCACTTAGGTG 111224 Query 551809 GCGAAGATTTTGATAATAGACTGGTATCATGGTGTGTTGAAGATTTTAAACGAAAAAACA 551868 | |||||||||||||| ||||| ||| || || || |||| ||||| |||| || | Sbjct 111223 GTGAAGATTTTGATAACAGACTTGTAGAATTTTGCGTACAAGACTTTAAGAGAAAGAATA 111164 Query 551869 AAG---TTGATCTATCTACATCTGCCAAAGCTCTTCGTCGTCTAAGAACTGCTTGCGAAA 551925 || | ||| || ||||| ||||| |||| | | | |||||||| || ||| Sbjct 111163 GAGGTATGGATTTAACTACAAATGCCAGAGCTTTAAGAAGATTAAGAACTCAATGTGAAC 111104 Query 551926 GAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTAGATTCATTATTTG 551985 | || || || || | |||||| |||||| | |||||||| | |||||| | | || Sbjct 111103 GTGCAAAGAGAACTTTATCATCTTCAACTCAAGCTACTATTGAGTTGGATTCACTTTATG 111044 Query 551986 AGGGAATTGATTAT--AATACGCCTATTTCGAGGGCCAAATTTGAAGATATTTGTTCTGA 552043 | || ||||||||| ||| ||| ||| || || | ||||||||| | ||| |||| Sbjct 111043 AAGGTATTGATTATTCAAT-TGCC-ATTAGTAGAGCTAGATTTGAAGAACTCTGTGCTGA 110986 Query 552044 TCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCAAAGATTGATAA 552103 | ||| | ||| | | ||||| || |||| | | ||| | || || || Sbjct 110985 TTACTTCCGTGCAACTTTAGCTCCAGTTGAGAAAGTACTCAAGGATGCTGGTATGGACAA 110926 Query 552104 ATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGA 552163 | |||||||| |||| | |||||||| ||||| | ||||| || | | | Sbjct 110925 AAGATCTGTACATGATGTTGTTTTGGTTGGTGGTTCTACTCGTATTCCAAAGGTCCAAGC 110866 Query 552164 AATG-TTAAGTTCTTATTTCAATGGTAAAAA---ATTAAATGAAAGTGTTAATCCAGATG 552219 || || || || ||| ||||| || | || || | || |||| ||||||| Sbjct 110865 CTTGATTCAGGAATTCTTT-AATGGAAAGGAGCCATGCAAAGCAA---TTAACCCAGATG 110810 Query 552220 AGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCT---TTCTGGACAAACTGATG 552276 | ||||||||||||||||| || | ||||| ||||| | | || ||| || || Sbjct 110809 AAGCTGTTGCCTATGGTGCTGCTGTACAAGCTGCTATCTTAAATGGTGAGCAATCTTCTG 110750 Query 552277 AAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAG 552336 | || || | | | |||||||| |||| |||| |||||||| ||||| | Sbjct 110749 ---CTGTTCAGGATCTCTTGTTATTAGATGTTGCTCCATTATCACTTGGTTTGGAAACTG 110693 Query 552337 TTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTC 552396 ||| ||| |||||||||| ||||| || | || || ||||| || ||||| | | Sbjct 110692 CTGGTGGTGTTATGACTAAGCTTATTGAGCGTAACACAACTATCCCAGCCAAAAAGACAC 110633 Query 552397 GTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAG 552456 || ||| | || ||| | ||||| |||| | ||| ||||||| | | |||||| | Sbjct 110632 AAGTCTTTACCACTTATGCCGATAACCAAAGCGGTGTATTAATTCAAGTCTATGAAGGTG 110573 Query 552457 AAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTC 552516 ||||| | ||||| ||||| | | ||||| | || | | || |||||||| | Sbjct 110572 AAAGAGCCATGACTAAGGATAACCACCTTCTTGGAAAGTTCCACCTTGATGGTATTCCAC 110513 Query 552517 CTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTT 552576 | || || | || ||||| |||||||| || ||||| ||||| ||||| ||||| |||| Sbjct 110512 CAGCACCAAGAGGTGTACCACAAATTGAGGTCACTTTTGATATTGATGCTAATGGTATTT 110453 Query 552577 TGAATGT 552583 |||| || Sbjct 110452 TGAACGT 110446 Score = 217 bits (240), Expect = 1e-50 Identities = 380/550 (69%), Gaps = 5/550 (1%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 |||||| ||||| |||||||| |||||||| ||||||||||| ||| ||||| || Sbjct 111900 AGCTATTGGTATTGATTTAGGTACCACATACTCGTGTGTTGGTGTATGGAGAAATGATAC 111841 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 ||| || ||| || | ||||||||||||||| | || || ||||| ||||| | || || Sbjct 111840 AGTAGATATTGTTCCAAATGATCAAGGTAACCGTACAACACCATCATATGTAGCATTTAC 111781 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 || ||||| | | | |||| ||||||||||| | |||| || | ||||| || Sbjct 111780 AGAGACTGAGCGTCTCATTGGAGATGCAGCAAAGAACCAAGTTGCTAGAAATCCAGATAA 111721 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230 ||| | ||||||||||||||| | ||||| |||| ||| | || | | || || Sbjct 111720 TACAGTCTTTGATGCTAAACGTCTTATTGGTAGAAAATTTGACGACCAGGCAGTGCAAAG 111661 Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTC---TGGAAAACCTTATATTGA 550287 ||||||| || ||||| || |||| |||| | | | ||||| |||| Sbjct 111660 TGATATGACTCACTGGCCATTTAAAATAGTTAGAGGCCCAAAAGACAAACCAATTATTAG 111601 Query 550288 AGCTACTCATGAAGGATCTGTTAAACAATTTTCA-CCAGAACAAATTTCATCTATGGTTT 550346 | | | || ||| | | || | || || | ||| ||||||| ||||||||| Sbjct 111600 TGTAAGTTATTTAGG-TGAGAAGAAGGAATTCCATGCTGAAGAAATTTCTGCTATGGTTT 111542 Query 550347 TAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAA 550406 || || ||||| | | | || | | || | | ||| | |||| ||| Sbjct 111541 TACAAAAGATGAAGGAGATTTCTGAAGCATACTTGGGACGCCCAATTAAGAATGCCGTAG 111482 Query 550407 TAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTA 550466 | ||||||||||| ||||| |||||||| ||||||||||| ||||| ||||| || | Sbjct 111481 TTACTGTACCAGCTTATTTCAATGACTCTCAACGTCAAGCAACTAAGGATGCAGGTGCAA 111422 Query 550467 TTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATG 550526 ||||||| | ||||| | | ||||| || ||||| || || || || |||| |||| Sbjct 111421 TTGCTGGTTTAAATGTAATGAGAATTATTAACGAACCAACAGCCGCAGCTATTGCTTATG 111362 Query 550527 GACTTGATAA 550536 | |||||||| Sbjct 111361 GTCTTGATAA 111352 Score = 87.8 bits (96), Expect = 1e-11 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 361701 CAAGACCATAAGCTAATGAAGCAGCTGTTGGTTCGTTAATTATTTTAATAACATTGAGTC 361760 ||||||||||||| | | || ||||||||||||||||| ||| | || ||||| | | Sbjct 111356 CAAGACCATAAGCAATAGCTGCGGCTGTTGGTTCGTTAATAATTCTCATTACATTTAAAC 111415 Query 361761 CCGCTATTTTTGATGCATCTAAAGTGGCTTGACGTTGTGCATCATTAAAATATGCAGGAA 361820 | || ||| |||||| ||| ||||||||||| | ||||| ||||| || || | Sbjct 111416 CAGCAATTGCACCTGCATCCTTAGTTGCTTGACGTTGAGAGTCATTGAAATAAGCTGGTA 111475 Query 361821 CAGTAA 361826 |||||| Sbjct 111476 CAGTAA 111481 >seq8 Length=503272 Score = 199 bits (220), Expect = 3e-45 Identities = 278/381 (73%), Gaps = 14/381 (4%) Strand=Plus/Plus Query 368783 GAGTTGAAGGAGTTTTGGATTGCTGGTTTGAATCAGGTTCTATGCCTTATGG-TCAAATA 368841 || |||||| |||||| ||||| ||||||||||| ||||| |||||||||| || | || Sbjct 364911 GAATTGAAGAAGTTTTTGATTGTTGGTTTGAATCTGGTTCAATGCCTTATGCATCTATTA 364970 Query 368842 CATTATCCATTTGATAACGCAAAATACTTTGATAATGATAAAGATTATGTGGCTGATTTT 368901 ||||||||||||| || | ||| ||| | ||| | ||| || |||||||| Sbjct 364971 -ATTATCCATTTGAAAATAAAGAATTATTTAAAAAT-----ATATTTCCTG-CTGATTTT 365023 Query 368902 GTAACAGAATCAATTGATCAAACACGTGGTTGGTTTTATACCCTATTAGTATTATCCACA 368961 || ||| | | ||||||||| | || ||||||||||| || | |||||||| ||| Sbjct 365024 GTTGGTGAAGGATTAGATCAAACAAGAGGATGGTTTTATACTCTTATGGTATTATCTACA 365083 Query 368962 GCTATTTTCGATAAACCGGCTTTTAAAAATGTAATAGTAACTGGTATTGTTAATGCATCT 369021 || | || ||| |||| |||||||| ||| | ||||||| |||| | || ||||| Sbjct 365084 GCATTATTTGATCAACCAGCTTTTAAGAATATTATAGTAAATGGTTTAGTATTAGCATCA 365143 Query 369022 GATGGTCAAAAGATGTCAAAAAG--TAAGGGTAATTATTCCGATCC-TAATATTTTAATT 369078 |||||| |||| |||||||| || ||| |||||| | ||||| | | || || || Sbjct 365144 GATGGTAAAAAAATGTCAAAGAGATTAA--AAAATTATCCTGATCCATTAGATATT-GTT 365200 Query 369079 GATAAATTTGGTGCTGATACTTTGAGATTATACCTATTGTCATCACCTGTAGTAAAAGCA 369138 |||||| ||| || || |||| ||||||| || | ||||| ||||||| |||| Sbjct 365201 AATAAATATGGAGCAGACTCTTTAAGATTATTTTTAATTAATTCACCAGTAGTAAGAGCA 365260 Query 369139 GAATCTATTAAATTTGATGAA 369159 ||| || | | |||| | ||| Sbjct 365261 GAAACTTTAAGATTTAAAGAA 365281 Score = 147 bits (162), Expect = 2e-29 Identities = 201/281 (72%), Gaps = 0/281 (0%) Strand=Plus/Minus Query 552303 GATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATC 552362 |||||||||||| ||||| | ||| | ||||| | || || || | ||| | ||| Sbjct 271974 GATGTTACTCCTTTATCTTTAGGTATTGAAACTTTGGGTGGAGTTTTTACTCGATTAATC 271915 Query 552363 GATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAAT 552422 ||||||||||||| || ||| || || || || |||||||| | |||| ||| Sbjct 271914 AATAGAAATACTACAATCCCTACCAAGAAGAGTCAAGTCTTTTCTACTGCTGCAGACAAT 271855 Query 552423 CAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAAT 552482 |||||| ||| ||| || |||| ||||||||||| | || || || ||||| Sbjct 271854 CAAACTCAAGTTGGAATCAAAGTTTTCCAAGGAGAAAGAGAGTTTGCTGCTGACAATAAG 271795 Query 552483 CAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATT 552542 |||||| ||| | | || |||||||| ||||| | ||||| || |||||| Sbjct 271794 TTACTTGGACAGTTTGAGATGATGGGAATTCCTCCAGCTCCAAGAGGAGTTCCTCAAATT 271735 Query 552543 GAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGT 552583 ||||||||||| ||||| ||||| |||||||| ||||||| Sbjct 271734 GAAGTTACTTTTGATATAGATGCAAATGGAATCATGAATGT 271694 >seq1 Length=677778 Score = 176 bits (194), Expect = 4e-38 Identities = 369/548 (67%), Gaps = 4/548 (1%) Strand=Plus/Plus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 || ||| ||||| |||||||| || || ||| ||||||||| ||| | ||||||| Sbjct 84039 AGTTATTGGTATTGATTTAGGTACTACTTATTCATGTGTTGGTATTTACAAGAATGGTAG 84098 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 ||| ||||||||| | ||||| ||||||||| | | ||| ||||||||||| || || || Sbjct 84099 AGTAGAAATTATTCCAAATGAACAAGGTAACCGTATTACACCATCTTATGTATCATTTAC 84158 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 || |||| ||| | ||||| |||| ||| | || || || ||||| | Sbjct 84159 TGATGATGAAAGATTAATCGGTGAGTCAGCTAAAAACCAGGCTACAATCAATCCGGTTCA 84218 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230 || | ||||||| || | | ||||| | |||| || ||| | || || Sbjct 84219 GACCTTGTTTGATGTAAAGAGACTTATTGGCCGTCGTTTCAAGGATGATTCCGTCCAAAA 84278 Query 550231 AGATATGAAGCATTGG--CCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAA 550288 |||| || ||||| || | ||||| ||||| | || ||||| ||| | Sbjct 84279 GGATAAGA--CATTGTTACCATATGAAATTATTAATAAAGAAAGTAAGCCTTACATTCAG 84336 Query 550289 GCTACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTA 550348 | ||| | |||| || || || | ||||| || |||| ||||||| || Sbjct 84337 GTTACAGTTAAAGGCGAGAAGAAGCAGTTAGCTCCAGAGGAAGTTTCTGCTATGGTCTTG 84396 Query 550349 ATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATA 550408 | || |||||| | | || |||| | | || | || || | | |||||||| Sbjct 84397 CTTAAGATGAAAGAGATTGCTGAAGCTTATCTCGGAAAGGAGGTAAAACACGCAGTAATT 84456 Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 ||||||||||| || |||||||| | ||||||||||| ||||| || ||||| ||| Sbjct 84457 ACTGTACCAGCTTACTTTAATGATGCTCAACGTCAAGCCACTAAGGACGCTGGTGCCATT 84516 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 ||||| | ||||| |||||||||| || ||||| || || || || |||| | ||| Sbjct 84517 GCTGGTTTGAATGTAATTCGTATTATTAACGAACCAACAGCAGCAGCTATTGCTTTTGGT 84576 Query 550529 CTTGATAA 550536 | ||||| Sbjct 84577 TTAGATAA 84584 Score = 113 bits (124), Expect = 4e-19 Identities = 137/185 (74%), Gaps = 4/185 (2%) Strand=Plus/Plus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 |||||||||||||| |||||| || ||||| | ||||||||| ||||| || || | Sbjct 542908 AATATTGTAATCAGATAGAGTCCTACCGTCTTCCAATTGTTTTCCAGCAAAGATCAGACG 542967 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 || |||||||| || || |||||||| |||||||| ||| |||||| |||||| || Sbjct 542968 CTGTTGATCAGGTGGGATACCTTCTTTGTCTTGAATCTTTGCTTTTACATTCTCAATAGT 543027 Query 563412 ATCAGTGTGAGTACA--TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATT 563469 || || || || ||| | || | || || ||||| | |||||| || ||||| Sbjct 543028 GTC--TGAAGGTTCAACTTCCAATGTGATGGTCTTCCCAGTTAAAGTTTTTACAAAAATC 543085 Query 563470 TGCAT 563474 ||||| Sbjct 543086 TGCAT 543090 >seq13 Length=714223 Score = 149 bits (164), Expect = 5e-30 Identities = 340/503 (68%), Gaps = 13/503 (3%) Strand=Plus/Plus Query 428102 CCGGTTCCAATTCCTTCTGTACCATTTACAAGAATCATTGGAATGACTGGTGCATAATAT 428161 || ||||| || || || |||||||| || |||||||||||||||| ||| ||||||| Sbjct 709835 CCTGTTCCTATACCATCAGTACCATTAACTAGAATCATTGGAATGATTGGAACATAATAC 709894 Query 428162 TGTGGTTCAATCATTTTATTATCTTCATAT-TGTAAATGTAAAATATCAAAATCATGCTC 428220 || |||||| || ||| |||||| |||| | ||| | | | |||| || Sbjct 709895 AAAGGCTCAATCTGTTGTCCATCATCATATAAGTAAGT-TAATAAAGGATCATCAGCTTC 709953 Query 428221 GATAAATAtttttttAGCCAATTCATCAAGTTGTGTAAAGATATATC---TTGCGCTTGC 428277 |||||| | | ||| | ||| | |||| ||||| ||||| | || ||||| Sbjct 709954 TGGAAATATATATCTAGTCCATTTAGATAGTTTAGTAAATATATAACGAGCAGCACTTGC 710013 Query 428278 GGAATCTTTACCTCCTGACATTCTAGTTCCAAATTGTCCATTAGGCATCAATAAATTAAT 428337 ||| || || ||| | ||||| | |||||||| ||| || |||||||| | Sbjct 710014 ---ATCCTTTCCACCTTCCTTTCTACTACCAAATTGACCACATGGTTCTAATAAATTTAG 710070 Query 428338 ATTATTACTTCCCACATAATTTTGGGCCATATTAACAATGGTACTAGTTAAGGATTGTTC 428397 |||||| ||||| ||| | ||||| |||||||| || || ||||| || || ||| Sbjct 710071 ATTATTGCTTCCAACAAAGTTTTGAGCCATATTTACTATAGTACTTTGTAGTGAAGATTC 710130 Query 428398 ACCATGATGATATTTAGTTCTTTTTGAAACTGCACCTTGTAATTCTGATACCTTTATTTC 428457 || |||||||| | | || | ||| ||| ||||| | ||||| | ||| Sbjct 710131 TCCGTGATGATAAGCACTATGTTCAGCAACATAACCAGCTAATTGTACAACCTTAAGTTC 710190 Query 428458 TTCTTTATAAATACCTTCTTCTACTGATCCATAAAATACTTTGCGTTGTGATGGTTTGAA 428517 || ||| | |||||| | || | || ||| ||| || | |||| ||||| || Sbjct 710191 --ATTATTAAGTTTCTTCTT-AAATGTTGCAAAAAGTACCTTTCTTTGTCCAGGTTTTAA 710247 Query 428518 TCCATCCATAATATTAGGTATAGATCTTAAATTATCATCCACTG-AGAATGATATTAGTT 428576 |||||| | | ||| || |||||||| | |||||| ||| ||| ||| |||| Sbjct 710248 TCCATCTAATAAATTTGGAATAGATCTAGTAGTATCAT-ATCTGCTAAATAATACAAGTT 710306 Query 428577 CTTGATGAATGAAATCATAATAT 428599 ||| ||| || |||||| ||||| Sbjct 710307 CTTTATGTATAAAATCAAAATAT 710329 >seq10 Length=227057 Score = 145 bits (160), Expect = 6e-29 Identities = 269/386 (70%), Gaps = 8/386 (2%) Strand=Plus/Plus Query 344255 TTTTATCTCCCACCATTTGTTTGAGACGTTGATAATATGTTGGACCAATGAATATTTTAA 344314 |||| || | ||||| ||||| | | |||||||| ||||| ||||| |||||| | Sbjct 149972 TTTTGTCATCAACCATATGTTTTAATCTCTGATAATAAGTTGGTCCAATAAATATTCTCG 150031 Query 344315 CTTCCATTCTTTGTCCCGTCATTCCATTATACATTGTTTCATTTCCCCATGCTTCATGTC 344374 || | ||| | |||||| ||||| |||||| ||||||||| | || | || Sbjct 150032 ACTCTAATCTCTTTCCCGTGTGGCCATTGTACATTACTTCATTTCCATTTTTTTGAAATC 150091 Query 344375 CTAAAGCTACTAAATCA-TCATTAATTTTATTAATATTAACTCCTGTAAATGGAGTTGCA 344433 | || ||| || | | | || | | || ||| | |||||| ||||| ||| Sbjct 150092 CAGAA-CTATGCAAACGGTTAGATATCTCTTCAACTGTAATTTTTGTAAAAGGAGTCGCA 150150 Query 344434 TCTCCATATACCCCTTTAATTGCACAAACTTTACCTAGTAAACATTCAATTAATTGACCT 344493 || || | | |||| ||||||||| ||||||| || | |||||||||||| || || Sbjct 150151 TCACCTTCCAATCCTTGAATTGCACATGCTTTACCAAGAAGACATTCAATTAAATGGCCA 150210 Query 344494 ATCGTCATACGTTTGGGCATACAATTAGGATTAATAATAATATCAGGAATTAATCCTGAT 344553 |||||||||||| || ||| || |||||| ||||||||||| |||| |||||| || Sbjct 150211 ATCGTCATACGTGAAGGAATAGCATGAGGATTCATAATAATATCCGGAA-TAATCC-CAT 150268 Query 344554 TTT--GTGAATGGAAGATCTGCA-CGATGAATTTTAAATCCAACTGTTCCTTTTTGTCCA 344610 || || || || | ||| || || || ||| | |||| ||| || ||||| ||| Sbjct 150269 CTTGAGTAAAAGGCATATCCTCAGTTCTGTATGTTATA-CCAATTGTACCCTTTTGGCCA 150327 Query 344611 GCTCTTGATGAGAATTTATCACCTAC 344636 ||| |||| |||||||| || || Sbjct 150328 TGTCTAGATGCAAATTTATCTCCGAC 150353 >seq4 Length=775478 Score = 122 bits (134), Expect = 7e-22 Identities = 137/181 (76%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 930654 AAAGTATTAATTGATTTTTCTTCACCAAATATTGCCAAAGAAATGCATATTGGACATTTG 930713 |||||| | ||||||||||| |||||||||||||| |||||||||||| | || |||||| Sbjct 453140 AAAGTAGTCATTGATTTTTCATCACCAAATATTGCAAAAGAAATGCATGTAGGGCATTTG 453081 Query 930714 CGTTCTACCATTATTGGAGAATCTTTATGTAGATTATATGAATATTGTGGAA-GTAAAGT 930772 | ||||| || ||||| || | ||| ||| | | ||||| | ||||| | | || Sbjct 453080 AGATCTACAATCATTGGTGATACAATATCTAGGATTTTGGAATACT-TGGAATTTGAGGT 453022 Query 930773 TCATCGAGTCAATCATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGCTTATAT 930832 | || | |||||| |||| |||||||| || |||||||| ||| | |||| ||| | Sbjct 453021 TTTAAGAATTAATCATGTTGGAGATTGGGGTACTCAATTTGGGATGCTTATTGAATATTT 452962 Query 930833 A 930833 | Sbjct 452961 A 452961 Score = 109 bits (120), Expect = 4e-18 Identities = 138/186 (74%), Gaps = 4/186 (2%) Strand=Plus/Minus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 |||||||||||||| ||||||||| ||| || | ||| || || ||||| || | | Sbjct 280904 AATATTGTAATCAGAGAGAGTTCTTCCATCCTCTAATTGCTTCCCTGCAAAGATTAAACG 280845 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 || |||||||| ||||||||||| ||||||||||| ||| ||||| |||||||| Sbjct 280844 CTGTTGATCAGGTGGAATTCCTTCCTTATCTTGAATCTTTGCCTTTACATTTTCAATTGT 280785 Query 563412 ATCAGTGTGAGTACA--TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATT 563469 || | || || || ||| | ||| | || || || || | ||| ||||| ||||| Sbjct 280784 GTCCG-ATG-GTTCAACTTCCAAAGTGATTGTCTTTCCTGTCAAAGTCTTAACAAAAATC 280727 Query 563470 TGCATA 563475 |||||| Sbjct 280726 TGCATA 280721 Score = 107 bits (118), Expect = 2e-17 Identities = 149/204 (73%), Gaps = 6/204 (3%) Strand=Plus/Minus Query 563274 AAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTT 563333 ||| | ||| | ||||| ||||||||||||| ||||||||| |||||| | ||| || Sbjct 281375 AAGTGGACTCTTTTTGG--ATATTGTAATCAGAAAGAGTTCTTCCATCTTCTAATTGCTT 281318 Query 563334 TCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTG 563393 || || || || | | ||| |||||||| |||||||| || ||||||||||| ||| Sbjct 281317 CCCTGCGAAGATTAAACGTTGTTGATCAGGTGGAATTCCCTCCTTATCTTGAATCTTTGC 281258 Query 563394 TTTTACTGCCTCAATTGTATCAGTGTGAGTACA--TTCGAGAGTAACAGTTTTACCAGTA 563451 || || ||||||||| || | || || || ||| | ||| | || || || || Sbjct 281257 CTTAACGTTCTCAATTGTGTCCG-ATG-GTTCAACTTCTAAAGTGATTGTCTTTCCTGTC 281200 Query 563452 AGAGTTTTAACGAAAATTTGCATA 563475 | ||||| || ||||| |||||| Sbjct 281199 AATGTTTTGACAAAAATCTGCATA 281176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029293937504110