Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20ubiquitum_20[genbank_20GCA_5F001865345.1_202016- 11-03] 39 sequences; 8,970,213 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq6 363 1e-94 seq1 232 4e-55 seq8 170 1e-36 seq10 163 2e-34 seq4 136 3e-26 seq13 116 2e-20 seq30 91.5 1e-12 >seq6 Length=315766 Score = 363 bits (402), Expect = 1e-94 Identities = 663/962 (69%), Gaps = 19/962 (2%) Strand=Plus/Minus Query 475318 TGACGTAACTTTACTATCACTCGAAGATGGTCTTTTCTCTGTAAGAGCAACAGCTGGAGA 475377 ||| ||| | ||| || | | || |||||| | || || | || || ||||| || Sbjct 111297 TGATGTATCATTATTAACTATTGAGGATGGTATCTTTGAGGTTAAGGCTACTGCTGGTGA 111238 Query 475378 TTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGTATCATGGTGTGTTGAAGATTT 475437 | | || | |||||||||||||||||||| ||||||||| || || || |||| || Sbjct 111237 TACTCACTTAGGTGGTGAAGATTTTGATAACAGACTTGTAGAATTTTGCGTACAAGACTT 111178 Query 475438 CAAGAGGAAAAATAAAGTT---GATCTTTCAACATCTGCTAAAGCATTAAGACGTCTTAG 475494 ||||| || |||| || | ||| | | ||| ||| | ||| |||||| | | || Sbjct 111177 TAAGAGAAAGAATAGAGGTATGGATTTAACTACAAATGCCAGAGCTTTAAGAAGATTAAG 111118 Query 475495 AACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGT 475554 |||| ||||||||||| ||| || || | || ||| | |||||| ||||| |||| | Sbjct 111117 AACTCAATGTGAACGTGCAAAGAGAACTTTATCATCTTCAACTCAAGCTACTATTGAGTT 111058 Query 475555 TGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAAATTTGAAGA 475614 ||||| |||| |||||| ||||||||| | | |||| || |||| ||||||||| Sbjct 111057 GGATTCACTTTATGAAGGTATTGATTATTCAATTGCCATTAGTAGAGCTAGATTTGAAGA 110998 Query 475615 TATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTCAGAGATTC 475674 | ||| ||||| ||| | ||| | | || ||||| |||| |||| ||| | Sbjct 110997 ACTCTGTGCTGATTACTTCCGTGCAACTTTAGCTCCAGTTGAGAAAGTACTCAAGGATGC 110938 Query 475675 TAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCC 475734 | | |||||| | || ||||| ||||| | || || ||||| || | ||||| Sbjct 110937 TGGTATGGACAAAAGATCTGTACATGATGTTGTTTTGGTTGGTGGTTCTACTCGTATTCC 110878 Query 475735 AAAAATAAGAGAAATGCTTTCATCATATTTTAATGGTAAAAAGTTAAATG-AAAGTG-TA 475792 ||| | || || || || |||||||| || || | || |||| | Sbjct 110877 AAAGGTCCAAGCCTTGATTCAGGAATTCTTTAATGGAAAGGAGCCA--TGCAAAGCAATT 110820 Query 475793 AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGT--- 475849 || || |||||||||||||| ||||| |||||||| ||||| ||||| ||| ||| Sbjct 110819 AACCCAGATGAAGCTGTTGCCTATGGTGCTGCTGTACAAGCTGCTATCTTAAATGGTGAG 110760 Query 475850 CAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGT 475909 ||||| | | || | |||| || || || ||||| | ||| | ||| Sbjct 110759 CAATCTTCTGCTGTTCAGGATC-TCTTGTTATTA--GATGTTGCTCCATTATCACTTGGT 110703 Query 475910 CTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGC 475969 | ||||| | ||| || |||||||||| |||||||| | || || |||||||| | Sbjct 110702 TTGGAAACTGCTGGTGGTGTTATGACTAAGCTTATTGAGCGTAACACAACTATCCCAGCC 110643 Query 475970 AAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATC 476029 ||||| || |||| ||| |||||||| | ||||| |||| |||| || ||| || Sbjct 110642 AAAAAGACACAAGTCTTTACCACTTATGCCGATAACCAAAGCGGTGTATTAATTCAAGTC 110583 Query 476030 TTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAA 476089 | ||||||||||||| | ||||| ||||| || ||||||| || | ||||| Sbjct 110582 TATGAAGGTGAAAGAGCCATGACTAAGGATAACCACCTTCTTGGAAAGTTCCACCTTGAT 110523 Query 476090 GGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCA 476149 |||||||| || || || ||||| || || |||||||| || ||||||||||||||||| Sbjct 110522 GGTATTCCACCAGCACCAAGAGGTGTACCACAAATTGAGGTCACTTTTGATATTGATGCT 110463 Query 476150 AATGGTATTCTTAATGTTACTGCTTGTGATAAATCTAGTAAC---AAGAGTAAAAATATA 476206 ||||||||| | || || | ||| ||||| |||| | || |||| || || Sbjct 110462 AATGGTATTTTGAACGTATCCGCTGTCGATAAG---AGTACCGGTAAAAGTAGCAAGATC 110406 Query 476207 ACTATTACAAACAATCGTGGTAGATTTACTGAAGAACAAATTCAACGTATGGTTGATGAA 476266 || ||||| ||| || |||||||| | | || | || ||||||||||| |||| Sbjct 110405 ACAATTACTAACGATAAGGGTAGATTATCAAAGGATGATATCGAACGTATGGTTAATGAT 110346 Query 476267 GC 476268 || Sbjct 110345 GC 110344 Score = 271 bits (300), Expect = 5e-67 Identities = 407/574 (71%), Gaps = 12/574 (2%) Strand=Plus/Minus Query 474308 AGTATATAAATGTCCAGAATTGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTA 474367 ||||| | || |||||| | ||||||||||||||||| || || ||| ||||| Sbjct 111915 AGTATCTGAAGGTCCAG-----CTATTGGTATTGATTTAGGTACCACATACTCGTGTGTT 111861 Query 474368 GCTGTTTGGCAAAATGGTAAAGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACA 474427 | ||| ||| ||||| || |||||| || || | ||||| |||||||| | |||||| Sbjct 111860 GGTGTATGGAGAAATGATACAGTAGATATTGTTCCAAATGATCAAGGTAACCGTACAACA 111801 Query 474428 CCATCATATGTTTCTTTTACTGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAA 474487 ||||||||||| | ||||| || ||||| | ||| ||||||||||| || || | ||| Sbjct 111800 CCATCATATGTAGCATTTACAGAGACTGAGCGTCTCATTGGAGATGCAGCAAAGAACCAA 111741 Query 474488 GCTGCATCTAATCCTGTTAATACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTT 474547 | ||| ||||| | |||||| | |||||||||||| | | |||||| | || ||| Sbjct 111740 GTTGCTAGAAATCCAGATAATACAGTCTTTGATGCTAAACGTCTTATTGGTAGAAAATTT 111681 Query 474548 GATGATACCA--CTGTCCAATCTGATATGCGTCATTGGCCTTTTAAGGT-GATAAATG-- 474602 || | |||| | || ||| ||||||| ||| ||||| ||||| | | || | | Sbjct 111680 GACG--ACCAGGCAGTGCAAAGTGATATGACTCACTGGCCATTTAAAATAGTTAGAGGCC 111623 Query 474603 TTGGTGGTAAACCATATATAGAAGCAATACACGCAGGTGAAACTAAACAATTTTCACCGG 474662 | |||||| ||| | || | |||||| | || |||| | | Sbjct 111622 CAAAAGACAAACCAATTATTAGTGTAAGTTATTTAGGTGAGAAGAAGGAATTCCATGCTG 111563 Query 474663 AACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGCGAGCTCATATCTTGGAC 474722 || |||||||| | ||||||||| || ||||| | | | |||| | |||| Sbjct 111562 AAGAAATTTCTGCTATGGTTTTACAAAAGATGAAGGAGATTTCTGAAGCATACTTGGGAC 111503 Query 474723 AAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAG 474782 | | | |||| ||| ||||||| ||||| ||||| ||||| ||||||||||||| Sbjct 111502 GCCCAATTAAGAATGCCGTAGTTACTGTACCAGCTTATTTCAATGACTCTCAACGTCAAG 111443 Query 474783 CAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAA 474842 ||||||| ||||| || |||||| ||| | ||||| | | |||||||| ||||||| Sbjct 111442 CAACTAAGGATGCAGGTGCAATTGCTGGTTTAAATGTAATGAGAATTATTAACGAACCAA 111383 Query 474843 CAGCAGCCGCACTTGCTTATGGTCTTGATAAGAA 474876 |||| || || |||||||||||||||||||||| Sbjct 111382 CAGCCGCAGCTATTGCTTATGGTCTTGATAAGAA 111349 >seq1 Length=677778 Score = 232 bits (256), Expect = 4e-55 Identities = 391/561 (70%), Gaps = 14/561 (2%) Strand=Plus/Plus Query 474332 ATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTA 474391 ||||||||||||||||| |||||||| ||||| | | ||| | ||||||| |||| Sbjct 84043 ATTGGTATTGATTTAGGTACTACTTATTCATGTGTTGGTATTTACAAGAATGGTAGAGTA 84102 Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451 ||||| ||| | ||||| |||||||| | | |||||||| ||||| || |||||||| Sbjct 84103 GAAATTATTCCAAATGAACAAGGTAACCGTATTACACCATCTTATGTATCATTTACTGAT 84162 Query 474452 ACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACT 474511 |||| | || || || | |||||| | || ||| || ||||| ||| | || Sbjct 84163 GATGAAAGATTAATCGGTGAGTCAGCTAAAAACCAGGCTACAATCAATCCGGTTCAGACC 84222 Query 474512 ATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTT---GATGATACCACTGTCCAATCT 474568 | ||||||| || ||| | ||||| ||| ||| |||||| || |||||| Sbjct 84223 TTGTTTGATGTAAAGAGACTTATTGGCCGTCGTTTCAAGGATGATTCC---GTCCAAAAG 84279 Query 474569 GATATGCGTCATTGG--CCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG 474626 |||| | ||||| || | | | | || ||| | |||| || || || | | Sbjct 84280 GATAAGA--CATTGTTACCATATGAAATTATTAATAAAGAAAGTAAGCCTTACATTCAGG 84337 Query 474627 CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAG 474686 | | ||| || | || || || | || || || ||||| | ||||| || Sbjct 84338 TTACAGTTAAAGGCGAGAAGAAGCAGTTAGCTCCAGAGGAAGTTTCTGCTATGGTCTTGC 84397 Query 474687 CCAAAATGAAACAAACCGCG--AGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAAT 474744 || |||||| | | || |||| ||||| ||| | || |||| | |||||||| Sbjct 84398 TTAAGATGAAAGAGATTGCTGAAGCT--TATCTCGGAAAGGAGGTAAAACACGCAGTAAT 84455 Query 474745 TACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAAT 474804 |||||| ||||| || ||||||||| ||||||||||||| ||||| || || || || Sbjct 84456 TACTGTACCAGCTTACTTTAATGATGCTCAACGTCAAGCCACTAAGGACGCTGGTGCCAT 84515 Query 474805 TGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGG 474864 ||| ||| | ||||| | ||||||||||| |||||||||||||| || |||||| ||| Sbjct 84516 TGCTGGTTTGAATGTAATTCGTATTATTAACGAACCAACAGCAGCAGCTATTGCTTTTGG 84575 Query 474865 TCTTGATAAGAATTCTGACAA 474885 | | |||||||| |||| || Sbjct 84576 TTTAGATAAGAAGGCTGAGAA 84596 Score = 113 bits (124), Expect = 3e-19 Identities = 133/180 (74%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 480590 AACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACG 480649 || ||| ||||||| |||||| || ||||| | ||| ||||||||||| || ||||| Sbjct 542908 AATATTGTAATCAGATAGAGTCCTACCGTCTTCCAATTGTTTTCCAGCAAAGATCAGACG 542967 Query 480650 TTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGT 480709 ||||||||||| || || ||||| ||||||||||||||| ||| ||| |||||||| Sbjct 542968 CTGTTGATCAGGTGGGATACCTTCTTTGTCTTGAATCTTTGCTTTTACATTCTCAATAGT 543027 Query 480710 ATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || | || | ||| | || || || || || || | ||| || || ||||| || Sbjct 543028 GTCTGAAGGTTCAACTTCCAATGTGATGGTCTTCCCAGTTAAAGTTTTTACAAAAATCTG 543087 >seq8 Length=503272 Score = 170 bits (188), Expect = 1e-36 Identities = 265/371 (71%), Gaps = 16/371 (4%) Strand=Plus/Plus Query 297322 GTTTTAGATTGTTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATTCATTATCCTTTT 297381 ||||| ||||||||||||||||| ||||| |||||||||| ||| ||||||| ||| Sbjct 364922 GTTTTTGATTGTTGGTTTGAATCTGGTTCAATGCCTTATGCATCTATTAATTATCCATTT 364981 Query 297382 GAAAATTCCGAAATTTTAGACACTTCACAAGATTATATTGCAGATTTTATAACAGAATCA 297441 |||||| ||| | || | | | | ||| | ||| |||||| | ||| | Sbjct 364982 GAAAATAAAGAATTATTTAAAAAT-----ATATT-TCCTGCTGATTTTGTTGGTGAAGGA 365035 Query 297442 ATTGATCAAACAAGAGGTTGGTTTTATACTTTATTAGTTCTTTCTACAGCTATATTTAAC 297501 | |||||||||||||| |||||||||||| | | || | |||||||| ||||| | Sbjct 365036 TTAGATCAAACAAGAGGATGGTTTTATACTCTTATGGTATTATCTACAGCATTATTTGAT 365095 Query 297502 AAACCAGCATTTAAAAATGTAATTGTTACAGGAATTGTTAACGCAGCTGATGGACAAAAA 297561 ||||||| ||||| ||| | || || | || | || ||| | ||||| ||||| Sbjct 365096 CAACCAGCTTTTAAGAATATTATAGTAAATGGTTTAGTATTAGCATCAGATGGTAAAAAA 365155 Query 297562 ATGTCAAAAAG--TAAAGGTAATTATCCTGATCCA-AATATTTTGATGGATAAATATGGT 297618 |||||||| || |||| ||||||||||||||| | || ||| | |||||||||| Sbjct 365156 ATGTCAAAGAGATTAAA--AAATTATCCTGATCCATTAGATATTG-TTAATAAATATGGA 365212 Query 297619 GCAGATACTTTACGTCTTTATTTATTATCAA--CACCTGTAGTTAAAGCCGAATCAATTA 297676 ||||| ||||| | |||||| | || || |||| ||||| | ||| ||| | | | Sbjct 365213 GCAGACTCTTTAAG--ATTATTTTTAATTAATTCACCAGTAGTAAGAGCAGAAACTTTAA 365270 Query 297677 AATTTGATGAA 297687 |||| | ||| Sbjct 365271 GATTTAAAGAA 365281 Score = 152 bits (168), Expect = 3e-31 Identities = 264/380 (69%), Gaps = 18/380 (5%) Strand=Plus/Minus Query 475790 GTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGT 475849 || || ||||||||||| |||||| |||||||| |||| |||| ||||| ||| Sbjct 272058 GTTAACCCTGATGAAGCCGTTGCAATGGGAGCTGCAATCCAGGCAGGAGTTTTAAAAGG- 272000 Query 475850 CAATCAGACGAGAAACTAAATAA-TATTGTACTTGTTGACGTAACTCCACTTTCATTAGG 475908 ||||| |||| | | |||| | |||| || ||||| | || ||||| Sbjct 271999 ----------AGAAATTAAAGACCTCTTGT--TGCTTGATGTTACTCCTTTATCTTTAGG 271952 Query 475909 TCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATG 475968 | ||||||| | || || || | ||| | || | ||||||||| | ||||| Sbjct 271951 TATTGAAACTTTGGGTGGAGTTTTTACTCGATTAATCAATAGAAATACTACAATCCCTAC 271892 Query 475969 CAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAAT 476028 ||| || |||| ||||| ||| | | || |||||||| || ||| || | Sbjct 271891 CAAGAAGAGTCAAGTCTTTTCTACTGCTGCAGACAATCAAACTCAAGTTGGAATCAAAGT 271832 Query 476029 CTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGA-ACTTTTA-ATCTT 476086 || |||| |||||| | || || || ||||| ||||||| | ||| | || | Sbjct 271831 TTTCCAAGGAGAAAGAGAGTTTGCTGCTGACAATAAGTTACTTGGACAGTTTGAGATGAT 271772 Query 476087 GAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGAT 476146 | || |||||||| ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct 271771 G--GGAATTCCTCCAGCTCCAAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATAGAT 271714 Query 476147 GCAAATGGTATTCTTAATGT 476166 |||||||| || | ||||| Sbjct 271713 GCAAATGGAATCATGAATGT 271694 Score = 131 bits (144), Expect = 1e-24 Identities = 325/487 (67%), Gaps = 10/487 (2%) Strand=Plus/Plus Query 295795 GATGGACCTCCATTTGCTACAGGAACTATGCATTATGGACATATTTTAGTCTCAACTATT 295854 ||||| || |||||||| |||||| | |||||||| ||||| | | || || Sbjct 363455 GATGGTCCCCCATTTGCAACAGGACTTCCACATTATGGCCATATACTTGCAGGTACAGTT 363514 Query 295855 AAAGATACCATGACTAGATATTTAACAATGAATGGTTATCAAGTTAATATGGGAATTGGT 295914 |||||| | || |||||| || || || ||| | | | | || |||| Sbjct 363515 AAAGATGTTGTTACAAGATATGCGACTCAAAAAGGATATTATTGTGAAAGAAGATTTGGA 363574 Query 295915 TGGGATTGCCATGGAGTTCCAATTGAA-ATGT--TGGCTaaaaaaaCTATCGGATATATC 295971 ||||||||||||||| | ||| | ||| ||| | | |||| || ||| ||||| | Sbjct 363575 TGGGATTGCCATGGATTACCAGTAGAACATGAAATAGATAAACAA-CTAA---ATATAAC 363630 Query 295972 AC--AAAGAAAGATTTATTGGAATACGGTATTGATCGTCATAATGATATTTGTCGTGATA 296029 | |||||| ||| | || | | || || ||| | ||||||| |||| | | Sbjct 363631 AAGTAAAGAA-GATGTTTTAAATAAAGGAATAGATTTTTATAATGAATCTTGTAGATCAA 363689 Query 296030 TGGTATTAAAATGTACTGATAAATGGTATTCTGATTTTGAGAGAATTGGAAGATGGATTG 296089 | ||||||| || |||| | ||||| || | || ||| |||||||| ||| | Sbjct 363690 TAGTATTAAGATATACTCAAGAATGGAGATCAACAGTAGAAAGAGTTGGAAGAATGATAG 363749 Query 296090 ATATTAATAATGAATATAAAACAATGGATAAAAATTTTATGGAATCTGTTATTTGGTCAT 296149 || || |||||| |||| |||||||||| ||| | |||| || | || ||| || Sbjct 363750 ATTTTGATAATGGTTATAGAACAATGGATTTAAAATATATGCAAACAGTATGGTGGGTAT 363809 Query 296150 TTAAACAACTTTATGAAAAGGAAATGATTTTTGAAGGTTATAAAGTTATGCCTTATTCTA 296209 |||||||||||| ||| || | | | | | || ||||| ||| ||||| ||||| | Sbjct 363810 TTAAACAACTTTTTGAGAAAAATCTAGTCTATAGAGCTTATAGAGTAATGCCATATTCAA 363869 Query 296210 CTGGTTGCAATACACCATTATCTCATTTTGAGGCAAAACAAAATTATAAAGAGATTATTG 296269 | | || |||||| | ||| ||||||| || | ||||||||||| | | || Sbjct 363870 CAGCATGTGCAACACCACTTTCTAATTTTGAATGTAATCTTAATTATAAAGATGTAAATG 363929 Query 296270 ATCCATC 296276 ||||||| Sbjct 363930 ATCCATC 363936 Score = 100 bits (110), Expect = 2e-15 Identities = 100/130 (77%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794 |||| || || ||||| ||||| || ||||||||||||||||| ||||||||||| || | Sbjct 272726 ATGCCGTTATCACTGTACCAGCTTACTTTAATGATTCTCAACGACAAGCAACTAAGGACG 272667 Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854 | || || ||||| | |||||| | | || ||||| || ||||||||||| || Sbjct 272666 CTGGCTCTATAGCAGGCTTAAATGTTACAAGGATCATTAACGAGCCAACAGCAGCAGCCT 272607 Query 474855 TTGCTTATGG 474864 | || ||||| Sbjct 272606 TAGCATATGG 272597 >seq10 Length=227057 Score = 163 bits (180), Expect = 2e-34 Identities = 282/401 (70%), Gaps = 18/401 (4%) Strand=Plus/Plus Query 269113 CTCGTTAACAATTGTGTCGG-TCCACGCGCTCTAGAGTGAGTTTTATCGCCCACCATTTG 269171 |||||||||| |||| | | ||| | ||||||| ||| |||| || | ||||| || Sbjct 149932 CTCGTTAACA-TTGTTACAGCTCCTCTAGCTCTAGCATGAATTTTGTCATCAACCATATG 149990 Query 269172 TTTTAAACGCTGATAATATGTCGGACCAATAAATATTTT-GACATGCATTTTTTCTCCCG 269230 |||||| | ||||||||| || || |||||||||||| | ||| || | || ||||| Sbjct 149991 TTTTAATCTCTGATAATAAGTTGGTCCAATAAATATTCTCGACTCTAATCTCTT-TCCCG 150049 Query 269231 TCATACCATTTGTCATTGTTTCATTTCCCCATGCTTCATATCCG----TATGAAACTAGT 269286 | ||||| |||| ||||||||| | || | |||| |||| || || Sbjct 150050 TGTGGCCATTGTACATTACTTCATTTCCATTTTTTTGAAATCCAGAACTATGCAAACGGT 150109 Query 269287 TCATCATTTATTTTATTAATATCTACACCTGTAAATGGTGTCGCATCACCATATACTCCT 269346 | || | || | | || | |||||| || ||||||||||| | | |||| Sbjct 150110 TAGATATCTCTTCAACTGTAATTTT----TGTAAAAGGAGTCGCATCACCTTCCAATCCT 150165 Query 269347 TTAATAGCACATACTTTTCCTAATAGACATTCAATCAATTGTCCAATGGTCATACGTTTT 269406 | ||| |||||| |||| || | ||||||||||| || || ||||| ||||||||| Sbjct 150166 TGAATTGCACATGCTTTACCAAGAAGACATTCAATTAAATGGCCAATCGTCATACGTGAA 150225 Query 269407 GGCATACAATTAGGATTAATAATAATATCTGGCACAAGTCCAGATTTAGTAAATGGCATA 269466 || ||| || |||||| ||||||||||| || | || ||| || |||||| |||||| Sbjct 150226 GGAATAGCATGAGGATTCATAATAATATCCGGAATAATCCCATCTTGAGTAAAAGGCATA 150285 Query 269467 TCTGCTC---TATGAATTTTAAATCCAACTGTACCTTTTTG 269504 || ||| | || || ||| | |||| |||||| ||||| Sbjct 150286 TC--CTCAGTTCTGTATGTTATA-CCAATTGTACCCTTTTG 150323 >seq4 Length=775478 Score = 136 bits (150), Expect = 3e-26 Identities = 137/178 (77%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 817086 CAAAAATTTTAATAGATTTTTCATCTCCAAATATTGCAAAGGAAATGCATATTGGACACT 817145 ||||| | | || ||||||||||| |||||||||||||| ||||||||| | || || | Sbjct 453142 CAAAAGTAGTCATTGATTTTTCATCACCAAATATTGCAAAAGAAATGCATGTAGGGCATT 453083 Query 817146 TGAGATCTACAATAATTGGTGAATCTCTTTGTAGAATATATGAATTTTGTGGATGTGAAG 817205 ||||||||||||| |||||||| | | | ||| || | |||| | | || ||| | Sbjct 453082 TGAGATCTACAATCATTGGTGATACAATATCTAGGATTTTGGAATACTTGGAATTTGAGG 453023 Query 817206 TACAAAGAATAAATCATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGCATA 817263 | |||||| |||||| |||| |||||||| || |||||||| ||| | |||| ||| Sbjct 453022 TTTTAAGAATTAATCATGTTGGAGATTGGGGTACTCAATTTGGGATGCTTATTGAATA 452965 Score = 123 bits (136), Expect = 2e-22 Identities = 150/199 (75%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 480572 AAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTT 480631 ||||| ||| |||| ||| ||| ||||||| |||||||| ||| || | |||||| Sbjct 280920 AAGTGGACTC-CTTTTGAAT-ATTGTAATCAGAGAGAGTTCTTCCATCCTCTAATTGCTT 280863 Query 480632 TCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTG 480691 || ||||| || | ||| ||||||||||| |||||||||||||| |||||||||||| Sbjct 280862 CCCTGCAAAGATTAAACGCTGTTGATCAGGTGGAATTCCTTCCTTATCTTGAATCTTTGC 280803 Query 480692 TTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGA 480750 || ||| |||||| || || | || | || || ||| || || || || || || | Sbjct 280802 CTTTACATTTTCAATTGTGTCCGATGGTTCAACTTCCAA-AGTGATTGTCTTTCCTGTCA 280744 Query 480751 GAGTCTTAACGAAAATTTG 480769 ||||||||| ||||| || Sbjct 280743 AAGTCTTAACAAAAATCTG 280725 Score = 102 bits (112), Expect = 5e-16 Identities = 94/118 (80%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 480572 AAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTT 480631 ||||| ||| | ||| || | || ||||||| |||||||| |||||| | |||||| Sbjct 281375 AAGTGGACTCTTTTTGGATA--TTGTAATCAGAAAGAGTTCTTCCATCTTCTAATTGCTT 281318 Query 480632 TCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTT 480689 || || || || | ||||||||||||||| |||||||| ||||| |||||||||||| Sbjct 281317 CCCTGCGAAGATTAAACGTTGTTGATCAGGTGGAATTCCCTCCTTATCTTGAATCTTT 281260 >seq13 Length=714223 Score = 116 bits (128), Expect = 2e-20 Identities = 220/316 (70%), Gaps = 12/316 (4%) Strand=Plus/Plus Query 355247 ATCCAGTGCCAATACCTTCTGTTCCATTAACTAAAATCATTGGAATTACAGGTACATAAA 355306 |||| || || ||||| || || |||||||||| |||||||||||| | || |||||| Sbjct 709833 ATCCTGTTCCTATACCATCAGTACCATTAACTAGAATCATTGGAATGATTGGAACATAAT 709892 Query 355307 ATACTGGTTCAATCATTTTATTATCTTCAAATTGAT--GTTGCAATACATCAAAATCATG 355364 | | || |||||| || ||| ||| || | ||| |||| | | |||| Sbjct 709893 ACAAAGGCTCAATCTGTTGTCCATCATCATATAAGTAAGTT--AATAAAGGATCATCAGC 709950 Query 355365 TTGTATGAAAATATATTTAGTTAATTGATTGAGTTGTGTGAAGATATATCGTGCA---CT 355421 || | || |||||| |||| ||| | |||| || || ||||| || ||| || Sbjct 709951 TTCTGGAAATATATATCTAGTCCATTTAGATAGTTTAGTAAATATATAACGAGCAGCACT 710010 Query 355422 TGCATTATCTTTGCCTCCACTTAATCTTGTACCAAATTGACCATTGGGAAGTAATAAATT 355481 ||||| | | ||| | ||| ||| |||||||||||||| || ||||||||| Sbjct 710011 TGCATCCTTTCCACCTTC-CTT--TCTACTACCAAATTGACCACATGGTTCTAATAAATT 710067 Query 355482 TATGTTGTTACTTCCAACATAATTTTGTGCCATTTTTATTATAGT-TTCAGTCATTGACT 355540 || || || ||||||||| | ||||| ||||| |||| |||||| | || | ||| Sbjct 710068 TAGATTATTGCTTCCAACAAAGTTTTGAGCCATATTTACTATAGTACTTTGT-AGTGAAG 710126 Query 355541 GTTCTCCATGATGATA 355556 |||||| |||||||| Sbjct 710127 ATTCTCCGTGATGATA 710142 >seq30 Length=890313 Score = 91.5 bits (100), Expect = 1e-12 Identities = 87/109 (80%), Gaps = 2/109 (2%) Strand=Plus/Minus Query 825452 CCAGGATGGCATATTGAATGTTCTACAAT-GATTCATAAAACAATAGGAAATCATCTTGA 825510 |||||||||||||||||||||||| ||| | |||| || ||| | ||| | | | || Sbjct 218911 CCAGGATGGCATATTGAATGTTCTGTAATGGCTTCA-AATACACTTGGATTCCCTATAGA 218853 Query 825511 TATACATTTTGGAGGAATTGATTTAAAATTTCCTCATCATCACAATGAA 825559 ||| ||| |||||| ||||| |||| ||| ||||||||| |||||||| Sbjct 218852 TATTCATAGTGGAGGTATTGACTTAAGATTCCCTCATCATGACAATGAA 218804 Score = 91.5 bits (100), Expect = 1e-12 Identities = 126/178 (71%), Gaps = 9/178 (5%) Strand=Plus/Minus Query 895163 CCAGGAGTAAAAGATGTTGTCAAATTATGGGTCGAAAAGACGGAGATGAATTATCTGTTT 895222 |||| | ||||||||| || ||||| ||||| || |||| | |||||| | || | Sbjct 662789 CCAGAATTAAAAGATGCTGCCAAATCATGGGAAGACAAGAAAGTGATGAACAACCTTGTG 662730 Query 895223 CTCAAATTATTTATCCTTGCATGCAAGTTGCAGATATTTTTGAACTCGAACCTGAAGGAA 895282 || | | ||||||| ||||||||| ||||||||| || | ||| || | Sbjct 662729 CTTCAGTATTTTATCCATGCATGCAATGTGCAGATATATTCCAGCTCAAAGC-------- 662678 Query 895283 TAGATATTTGTCAATTAGGTGTTGATCAACGTAAAGTTAATATGCTCGCTCTCGAATA 895340 ||||||||| || |||| | |||||| | |||||||||||||| ||| ||||| Sbjct 662677 -AGATATTTGCCAGCTAGGGATGGATCAAAGAAAAGTTAATATGCTTGCTAGGGAATA 662621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268177527100772