Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20ubiquitum_20[genbank_20GCA_5F001865345.1_202016- 11-03] 39 sequences; 8,970,213 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq4 165 2e-35 >seq4 Length=775478 Score = 165 bits (182), Expect = 2e-35 Identities = 168/219 (77%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 210896 AAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCT 210955 |||||| | || | || | |||||||||||||||||| || ||||| | ||| || || Sbjct 281395 AAGTCTCAATACCAAATGTAAAGTGGACTCTTTTTGGATATTGTAATCAGAAAGAGTTCT 281336 Query 210956 TCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTC 211015 ||||||||| | ||||| ||||||||||| | |||||||| ||||| |||| ||| || Sbjct 281335 TCCATCTTCTAATTGCTTCCCTGCGAAGATTAAACGTTGTTGATCAGGTGGAATTCCCTC 281276 Query 211016 CTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGT 211075 ||| || || |||||| || ||||| || || ||||| || |||||| || | ||| Sbjct 281275 CTTATCTTGAATCTTTGCCTTAACGTTCTCAATTGTGTCCGATGGTTCAACTTCTAAAGT 281216 Query 211076 GATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||| |||||||| || | || || ||||| | |||||| Sbjct 281215 GATTGTCTTTCCTGTCAATGTTTTGACAAAAATCTGCAT 281177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151420786235