Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F000769155.2_202016-09- 22] 2,297 sequences; 44,034,411 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq1521 102 6e-17 >seq1521 Length=1535 Score = 102 bits (112), Expect = 6e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 97076 CATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGGCGATCATAC 97135 |||| || ||||| ||||||||||| || || ||||||| || || || ||||| Sbjct 412 CATCACCAAAAGTATGAATAAATTCACCGGGTTGTAAATCACAAACCTGCGCAATCATTA 353 Query 97136 AAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCTGATC 97195 | ||||| | || ||| ||||| || || || || |||| | |||||| | Sbjct 352 AGGTTAACAAAGCATAAGAGGCAATATTGAACGGAACGCCTAAAAATACATCAGCACTGC 293 Query 97196 TTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAACTGACTCAATACATGAC 97255 |||||||| ||| ||| | | ||||| ||||||||||||| |||| |||| | Sbjct 292 GTTGATATAGCTGGCAGCTTAATTGTCCATTGGCCACATAAAACTGAAACAATGCATGGC 233 Query 97256 AGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACACATCA 97306 |||| || ||||||||||| | ||| |||||||| |||| || || Sbjct 232 AGGGCATTAATGCCATTTTTGGTAAATCGGTAACATTCCATGCACTCACCA 182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346774291890290