Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F000769155.2_202016-09- 22] 2,297 sequences; 44,034,411 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1704 91.5 4e-13 >seq1704 Length=693 Score = 91.5 bits (100), Expect = 4e-13 Identities = 109/147 (74%), Gaps = 6/147 (4%) Strand=Plus/Plus Query 22858 AATCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGAAAAA 22917 || ||||| || | |||||| | || || | |||| || ||||||||||| |||||| Sbjct 10 AACCCATTCGATTTTATGGAAATGATCTCCTTACAAGGCAAAACCAATTTCTTTGAAAAA 69 Query 22918 AGAGTTGGTGAATACCAAAAAGCAGGTGTTATGGATGCATTGAATGATAGTTCAAAACAC 22977 ||||| || || || |||||||| ||||| |||| | || |||| ||| ||| Sbjct 70 AGAGTGGGCGATTATCAAAAAGCCGGTGTAATGGGTACAGCTAATG---CTTC---ACAA 123 Query 22978 GGATTTACATTAGATGAAGAATTTTAA 23004 |||| ||||||||||||| |||||| Sbjct 124 TCATTTTCATTAGATGAAGATTTTTAA 150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303315241896254