Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F000769155.2_202016-09- 22] 2,297 sequences; 44,034,411 total letters Query= NC_009904.1 Length=142072 Score E Sequences producing significant alignments: (Bits) Value seq1800 84.2 2e-11 seq143 84.2 2e-11 >seq1800 Length=151541 Score = 84.2 bits (92), Expect = 2e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 136992 GGTCTCGAACCTGCGACCGTTCGGTTATGAGCCGAATGCTCTGACCAACTGAGCTAAACG 137051 ||||||||||| |||||| ||||||||| ||||||||||||| ||||||||||||| | | Sbjct 82875 GGTCTCGAACCGGCGACCTTTCGGTTATTAGCCGAATGCTCTAACCAACTGAGCTATAGG 82816 Query 137052 TCCT 137055 ||| Sbjct 82815 ACCT 82812 >seq143 Length=152143 Score = 84.2 bits (92), Expect = 2e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 136992 GGTCTCGAACCTGCGACCGTTCGGTTATGAGCCGAATGCTCTGACCAACTGAGCTAAACG 137051 ||||||||||| |||||| ||||||||| ||||||||||||| ||||||||||||| | | Sbjct 93320 GGTCTCGAACCGGCGACCTTTCGGTTATTAGCCGAATGCTCTAACCAACTGAGCTATAGG 93379 Query 137052 TCCT 137055 ||| Sbjct 93380 ACCT 93383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 454489350099840