Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F000769155.2_202016-09- 22] 2,297 sequences; 44,034,411 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq1704 91.5 2e-13 >seq1704 Length=693 Score = 91.5 bits (100), Expect = 2e-13 Identities = 105/141 (74%), Gaps = 3/141 (2%) Strand=Plus/Minus Query 18612 TTAAAAATCAACATCCAAAGAAAAAGAATTCTCTTCATTAGAATT---CATTACTCCCAT 18668 ||||||||| |||| || ||||| || | |||||| | |||||| || Sbjct 150 TTAAAAATCTTCATCTAATGAAAATGATTGTGAAGCATTAGCTGTACCCATTACACCGGC 91 Query 18669 TTTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACA 18728 ||||||||| ||| | |||||||||||||||||||| ||||| || | ||| || || Sbjct 90 TTTTTGATAATCGCCCACTCTTTTTTCAAAGAAATTGGTTTTGCCTTGTAAGGAGATCAT 31 Query 18729 TTCCATAAAATCAAATGGATT 18749 |||||||||||| ||||| || Sbjct 30 TTCCATAAAATCGAATGGGTT 10 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562092660451080