Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F000769155.2_202016-09- 22] 2,297 sequences; 44,034,411 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq1999 87.8 2e-11 >seq1999 Length=46803 Score = 87.8 bits (96), Expect = 2e-11 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 1628448 CATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTT 1628507 |||||||||||| |||||| || ||||||||| | || || |||||||||| Sbjct 34477 CATAAAGAGGTCCGGAACCCACAGGGCCGGAAAGAGGTCCCTGGCGCGCATCTCCTCCTT 34536 Query 1628508 GCCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTA 1628567 || || || ||| || || || | |||| ||||| | ||||| ||||||| ||| Sbjct 34537 CCCATGATTTTTTCGGATATCCAGAAACTCGAAGATGTCTGAATGCCAGGGCTCCACGTA 34596 Query 1628568 GCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 1628600 |||| | ||||||||||||||||||||| Sbjct 34597 CACTGCAAGGCTGCCCTTGCGCTTGCCGCCGCC 34629 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106950697423149