Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F000769155.2_202016-09- 22] 2,297 sequences; 44,034,411 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1111 91.5 2e-12 >seq1111 Length=40824 Score = 91.5 bits (100), Expect = 2e-12 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 796213 CTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGCGAG 796272 || || ||||||||||| || || ||||| || ||||| |||| || | | | || Sbjct 7183 CTTGCAGCGAAAAAGGCAAGCACATGCTTAATGAAGTGCTGCTCATCCTTGTTCAGACTT 7124 Query 796273 ACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGCCTCG 796332 |||||| ||| ||| | ||||||| ||||||||| |||||||| |||||||| Sbjct 7123 TCCCAGTCTACCAAGTCCCTGTGTAGGTCGATCTCCTCGGCTGTCCAAAAAGAGGCCTCC 7064 Query 796333 GCCTTTTTGTACATCTCCCA 796352 ||||| || ||||| ||||| Sbjct 7063 GCCTTCTTATACATATCCCA 7044 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916002057633383