Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F001305735.1_202015-10-
02] 865 sequences; 44,563,857 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq17 82.4 8e-11
>seq17
Length=130260
Score = 82.4 bits (90), Expect = 8e-11
Identities = 100/133 (75%), Gaps = 5/133 (4%)
Strand=Plus/Minus
Query 16493 CTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCC 16552
||||| | || ||||| |||||||| | ||| | || ||| ||||||| | || |||
Sbjct 7726 CTGTATGTCTCGGAGTGGATGTTCTCCACGGCAAGTTGGAATGCATAGAAACTGCGCGCC 7667
Query 16553 TCCGCTATTTGTACTTCCACGTAA--AATCGTTCCGCCAGGTTCTCATTCACGATACCGT 16610
|||| |||||||||||| ||| | || | || |||| ||| || | ||||| ||||
Sbjct 7666 TCCGGTATTTGTACTTC--CGTCATGAACCTCTCGGCCAAGTTTTCCATGACGATTCCGT 7609
Query 16611 CACTTGCAGCAAA 16623
||| |||||||||
Sbjct 7608 CAC-TGCAGCAAA 7597
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511408870331800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |