Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F001305735.1_202015-10- 02] 865 sequences; 44,563,857 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq859 86.0 1e-11 >seq859 Length=158681 Score = 86.0 bits (94), Expect = 1e-11 Identities = 149/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 35569 TCTTCACCTTATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGTGGCTAATGG 35628 ||||||| | ||||| || ||||| |||||| || ||| ||||| || | ||||| Sbjct 74789 TCTTCACTTGATGGCGCTGCCTCCCTGCCACTTGTTGAGTCAGTTTTACGTCTCGAATGG 74730 Query 35629 AGAATTGTCGTGCCAGTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAA 35688 | | || |||| |||| ||| ||||| | || || ||| | || || || ||||| Sbjct 74729 AAGTCTCTCCTGCCTCATGTACCAGAGAAGCTGCGACGTAGGGCTTGGAGTTCCTTTCAA 74670 Query 35689 TATTGCATCATACTCTCTTCTGACTCATCTGATGGCCAGTATGGTGGGTCTAAAACCGGG 35748 || || || |||||||| ||||||| || |||||| || || | | ||||| Sbjct 74669 CATCGCTTCCTACTCTCTGCTGACTCTCATGCTGGCCAAGATATGCGGCTTCACGCCGGG 74610 Query 35749 AGAGTTTATCCTCACTCTTGGTGACGCACACATTTAT 35785 |||||| ||| | || || | |||| |||||| Sbjct 74609 AGAGTTCGTCCACTGCCTCGGCAATACACATATTTAT 74573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989573032626075