Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F001305735.1_202015-10- 02] 865 sequences; 44,563,857 total letters Query= NC_009904.1 Length=142072 Score E Sequences producing significant alignments: (Bits) Value seq322 84.2 2e-11 seq157 84.2 2e-11 >seq322 Length=251774 Score = 84.2 bits (92), Expect = 2e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 136992 GGTCTCGAACCTGCGACCGTTCGGTTATGAGCCGAATGCTCTGACCAACTGAGCTAAACG 137051 ||||||||||| |||||| ||||||||| ||||||||||||| ||||||||||||| | | Sbjct 44804 GGTCTCGAACCGGCGACCTTTCGGTTATTAGCCGAATGCTCTAACCAACTGAGCTATAGG 44863 Query 137052 TCCT 137055 ||| Sbjct 44864 ACCT 44867 >seq157 Length=331103 Score = 84.2 bits (92), Expect = 2e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 136992 GGTCTCGAACCTGCGACCGTTCGGTTATGAGCCGAATGCTCTGACCAACTGAGCTAAACG 137051 ||||||||||| |||||| ||||||||| ||||||||||||| ||||||||||||| | | Sbjct 220588 GGTCTCGAACCGGCGACCTTTCGGTTATTAGCCGAATGCTCTAACCAACTGAGCTATAGG 220647 Query 137052 TCCT 137055 ||| Sbjct 220648 ACCT 220651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 454497485692800