Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F001305735.1_202015-10- 02] 865 sequences; 44,563,857 total letters Query= NC_020860.1 Length=44557 Score E Sequences producing significant alignments: (Bits) Value seq759 156 1e-33 >seq759 Length=706 Score = 156 bits (172), Expect = 1e-33 Identities = 202/275 (73%), Gaps = 3/275 (1%) Strand=Plus/Plus Query 14550 AACTTTAAAAGATGTATTAACAGGTTTAGGTTTCATTGTTAGCAATGTTGCTGAGGACTC 14609 ||| ||||||||| ||||||||| ||||| ||| || | | ||| ||| | ||| || Sbjct 260 AACATTAAAAGATATATTAACAGCATTAGGGTTCGTTTTAAACAACGTTACCGAGCTATC 319 Query 14610 AAAATTTGATAATTAAG-ATGCCAAATCCAATTAATGAACACAGTACCTTAATGGCTAAA 14668 ||||| ||||||||| ||| ||| | ||||| | |||||||||| ||| | ||||| Sbjct 320 TAAATTCGATAATTAATTATGGCAATTTCAATTCAAGAACACAGTAGTTTATTAACTAAA 379 Query 14669 AAAGTCGTTGGGAAGTTCAAAGAAATTATAGATGTAAAAGCTGGTTTTTCAGCATTTTTT 14728 ||| | ||||| || || |||||| ||| || | | | || || | | | ||| Sbjct 380 AAAATTGTTGGTAAATTTGAAGAAACAATACCAGTTAGAACGGGATTCGCTGGGTGGTTT 439 Query 14729 CCTCGTGAAACTACAGCTACTT-TGATGGTTGATGTTGAAGTTCAAAGAGACAACGATAC 14787 || ||||| ||| |||||| ||| | | |||||||| |||||||||||||||||| Sbjct 440 CCAGAAGAAACAACACCTACTTATGAAG-TAGATGTTGAGGTTCAAAGAGACAACGATTT 498 Query 14788 TATAGCGGTTGATGTTACTCGATTTACTGACGGAA 14822 || |||||||| ||| | ||||||| || |||| Sbjct 499 AATGGCGGTTGACGTTGTTAGATTTACCGAAGGAA 533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 142459336660470