Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F001305735.1_202015-10- 02] 865 sequences; 44,563,857 total letters Query= NC_021791.1 Length=39148 Score E Sequences producing significant alignments: (Bits) Value seq597 168 2e-37 >seq597 Length=1570 Score = 168 bits (186), Expect = 2e-37 Identities = 188/247 (76%), Gaps = 8/247 (3%) Strand=Plus/Minus Query 2388 CCAAATAATTTGATTAACCATATTTTCATAACCAAACACATCATCTAAAATACATCTTAA 2447 ||||||||||| || | ||| | ||| ||||| | |||||| | ||| || | || Sbjct 1313 CCAAATAATTTCGTTTCTAAAATTATTATACCCAAAAATATCATCCATAATGCAACGCAA 1254 Query 2448 CCAATGGCTTATT-TTGTAATCCATTTGTAAATAAATACTACCTGTATCTTTTAAAATAC 2506 |||||| | | ||||| |||||||||||||||||||| ||||| | ||| || | | Sbjct 1253 CCAATGATTAACCCTTGTA-TCCATTTGTAAATAAATACTTCCTGTGTTTTTCAATACTC 1195 Query 2507 GATGCATTTCTTTAATTCTTGGTATGTAATGTTCTTCTATTATTTCACGTTTA---GGTT 2563 | ||||||||||| | |||||| | |||||| |||| ||||| | | || |||| Sbjct 1194 GGTGCATTTCTTTTAATCTTGGCAAATAATGTGCTTC---AATTTCGCTTCTAATCGGTT 1138 Query 2564 TTAAATCTTGGTAGTCTTTAAACTTTCTGCCAGTTCCATAAAGTATATCACAGTAAATTA 2623 |||| |||||||| || || ||||| || || ||||||||||||||||||||||||| Sbjct 1137 TTAAGTCTTGGTAATCCCCGAAATTTCTACCCGTACCATAAAGTATATCACAGTAAATTA 1078 Query 2624 AATCTAC 2630 ||||||| Sbjct 1077 AATCTAC 1071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 125150714454300