Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F001305735.1_202015-10- 02] 865 sequences; 44,563,857 total letters Query= NC_027335.1 Length=145518 Score E Sequences producing significant alignments: (Bits) Value seq322 84.2 2e-11 seq157 84.2 2e-11 >seq322 Length=251774 Score = 84.2 bits (92), Expect = 2e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 102472 AGGACGTTTAGCTCAGTTGGTCAGAGCATTCGGCTCATAACCGAACGGTCGCAGGTTCGA 102531 ||| | | ||||||||||||| ||||||||||||| ||||||||| |||||| ||||||| Sbjct 44867 AGGTCCTATAGCTCAGTTGGTTAGAGCATTCGGCTAATAACCGAAAGGTCGCCGGTTCGA 44808 Query 102532 GACC 102535 |||| Sbjct 44807 GACC 44804 >seq157 Length=331103 Score = 84.2 bits (92), Expect = 2e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 102472 AGGACGTTTAGCTCAGTTGGTCAGAGCATTCGGCTCATAACCGAACGGTCGCAGGTTCGA 102531 ||| | | ||||||||||||| ||||||||||||| ||||||||| |||||| ||||||| Sbjct 220651 AGGTCCTATAGCTCAGTTGGTTAGAGCATTCGGCTAATAACCGAAAGGTCGCCGGTTCGA 220592 Query 102532 GACC 102535 |||| Sbjct 220591 GACC 220588 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 465524566461200