Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F001305735.1_202015-10- 02] 865 sequences; 44,563,857 total letters Query= NC_028890.1 Length=162486 Score E Sequences producing significant alignments: (Bits) Value seq852 82.4 8e-11 seq159 82.4 8e-11 >seq852 Length=420446 Score = 82.4 bits (90), Expect = 8e-11 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 27084 CGCCTTCTTAGCTCAGTTGGTAGAGCGATTGACTTGTAATCAATAGGTCGTGGGTTCGAA 27143 ||||| |||||| |||||||||| ||| |||| | |||||||| ||||||||||||||| Sbjct 3742 CGCCTCCTTAGCACAGTTGGTAGTGCGTTTGATTCGTAATCAAAAGGTCGTGGGTTCGAT 3801 Query 27144 TCCTACAG 27151 ||| |||| Sbjct 3802 TCCCACAG 3809 >seq159 Length=44282 Score = 82.4 bits (90), Expect = 8e-11 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 27082 TACGCCTTCTTAGCTCAGTTGGTAGAGCGATTGACTTGTAATCAATAGGTCGTGGGTTCG 27141 || |||| |||||| |||||||||| ||| |||| | |||||||| |||||||||||||| Sbjct 8550 TAGGCCTCCTTAGCACAGTTGGTAGTGCGTTTGATTCGTAATCAAAAGGTCGTGGGTTCG 8609 Query 27142 AATCCTACAG 27151 | ||| |||| Sbjct 8610 ATTCCCACAG 8619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 519821579368400