Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F001305735.1_202015-10- 02] 865 sequences; 44,563,857 total letters Query= NC_028924.1 Length=48689 Score E Sequences producing significant alignments: (Bits) Value seq597 192 2e-44 >seq597 Length=1570 Score = 192 bits (212), Expect = 2e-44 Identities = 191/246 (78%), Gaps = 6/246 (2%) Strand=Plus/Minus Query 30546 CCATATTATTTCACATAAAAACATATCATAACCAAAAACATCATCCAAAATACATCGCAT 30605 ||| || ||||| | ||| ||| ||| ||||||| |||||||| ||| || |||| Sbjct 1313 CCAAATAATTTCGTTTCTAAAATTATTATACCCAAAAATATCATCCATAATGCAACGCAA 1254 Query 30606 CCAATGATTAATCTTGCTATCCATTTGTAAATAAATACTACCTGTGTCTTTTAAAACACG 30665 ||||||||||| | | |||||||||||||||||||||| ||||||| ||| || || || Sbjct 1253 CCAATGATTAACCCTTGTATCCATTTGTAAATAAATACTTCCTGTGTTTTTCAATACTCG 1194 Query 30666 GTGCATTTCTTTAATTCTTGGTATGTAATGCTCTTCTATTATTTCACGTTTA---GGCTT 30722 |||||||||||| | |||||| | ||||| |||| ||||| | | || || || Sbjct 1193 GTGCATTTCTTTTAATCTTGGCAAATAATGTGCTTC---AATTTCGCTTCTAATCGGTTT 1137 Query 30723 TAAATCTTGGTAGTCCTTAAACTTTCTACCAGTTCCATACAATATATCACAATAAATCAA 30782 ||| |||||||| ||| || |||||||| || ||||| | ||||||||| ||||| || Sbjct 1136 TAAGTCTTGGTAATCCCCGAAATTTCTACCCGTACCATAAAGTATATCACAGTAAATTAA 1077 Query 30783 ATCTAC 30788 |||||| Sbjct 1076 ATCTAC 1071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 155681600841630