Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F001305735.1_202015-10- 02] 865 sequences; 44,563,857 total letters Query= NC_031103.1 Length=165772 Score E Sequences producing significant alignments: (Bits) Value seq865 82.4 8e-11 seq864 82.4 8e-11 >seq865 Length=5557 Score = 82.4 bits (90), Expect = 8e-11 Identities = 64/75 (85%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 70150 CTGATTGACGGAATCGAACCGCCGACCTTCTCATTACAAGTGAGTTGCTCTACCTACTGA 70209 ||||| | ||||||||||| || ||||||| ||||||||| ||| ||||||||| ||| Sbjct 184 CTGATAAAGGGAATCGAACCCCCAACCTTCTGATTACAAGTCAGTGGCTCTACCT-TTGA 242 Query 70210 GCTAAATCAGCAAAA 70224 |||| |||||||||| Sbjct 243 GCTATATCAGCAAAA 257 >seq864 Length=24124 Score = 82.4 bits (90), Expect = 8e-11 Identities = 64/75 (85%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 70150 CTGATTGACGGAATCGAACCGCCGACCTTCTCATTACAAGTGAGTTGCTCTACCTACTGA 70209 ||||| | ||||||||||| || ||||||| ||||||||| ||| ||||||||| ||| Sbjct 23969 CTGATAAAGGGAATCGAACCCCCAACCTTCTGATTACAAGTCAGTGGCTCTACCT-TTGA 24027 Query 70210 GCTAAATCAGCAAAA 70224 |||| |||||||||| Sbjct 24028 GCTATATCAGCAAAA 24042 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530336665672800