Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F002019455.1_202017-03- 06] 1,291 sequences; 42,346,107 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq65 86.0 1e-11 >seq65 Length=305635 Score = 86.0 bits (94), Expect = 1e-11 Identities = 149/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 35569 TCTTCACCTTATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGTGGCTAATGG 35628 ||||||| | ||||| || ||||| |||||| || ||| ||||| || | ||||| Sbjct 83986 TCTTCACTTGATGGCGCTGCCTCCCTGCCACTTGTTGAGTCAGTTTTACGTCTCGAATGG 84045 Query 35629 AGAATTGTCGTGCCAGTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAA 35688 | | || |||| |||| ||| ||||| | || || ||| | || || || ||||| Sbjct 84046 AAGTCTCTCCTGCCTCATGTACCAGAGAAGCTGCGACGTAGGGCTTGGAGTTCCTTTCAA 84105 Query 35689 TATTGCATCATACTCTCTTCTGACTCATCTGATGGCCAGTATGGTGGGTCTAAAACCGGG 35748 || || || |||||||| ||||||| || |||||| || || | | ||||| Sbjct 84106 CATCGCTTCCTACTCTCTGCTGACTCTCATGCTGGCCAAGATATGCGGCTTCACGCCGGG 84165 Query 35749 AGAGTTTATCCTCACTCTTGGTGACGCACACATTTAT 35785 |||||| ||| | || || | |||| |||||| Sbjct 84166 AGAGTTCGTCCACTGCCTCGGCAATACACATATTTAT 84202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989567631352905