Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F002019455.1_202017-03- 06] 1,291 sequences; 42,346,107 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq578 84.2 2e-11 >seq578 Length=112255 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 43913 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCT--CATCGT 43970 |||||||| || || ||| || ||||| || ||||| || || | || |||| | Sbjct 51760 ACCAAATGAAGGGTTGACTCCTTCTGAATGTTGTAATCAGA-AAGTGTC-CTGCCATCCT 51703 Query 43971 CCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTG 44030 ||| || || || ||||| || | || ||||| || |||| | ||||| ||||| Sbjct 51702 CCAGCTGCTTGCCGGCAAAAATGAGACGCTGCTGATCAGGAGGAATGCCTTCCTTATCCT 51643 Query 44031 AAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTT 44090 ||| ||| || || | | | ||||||| ||||| || || | || ||||| | Sbjct 51642 GAATCTTTGCCTTCACATTTTCGATGGTATCTGATGGCTCAACGTCCAATGTGATTGTCT 51583 Query 44091 TACCGGTTAAAGTCTTCACAAATATTTGCATG 44122 | || || ||||||||||||||||| |||||| Sbjct 51582 TGCCAGTCAAAGTCTTCACAAATATCTGCATG 51551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354772017907068