Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F002019455.1_202017-03- 06] 1,291 sequences; 42,346,107 total letters Query= NC_009904.1 Length=142072 Score E Sequences producing significant alignments: (Bits) Value seq1178 84.2 2e-11 seq212 84.2 2e-11 >seq1178 Length=136845 Score = 84.2 bits (92), Expect = 2e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 136992 GGTCTCGAACCTGCGACCGTTCGGTTATGAGCCGAATGCTCTGACCAACTGAGCTAAACG 137051 ||||||||||| |||||| ||||||||| ||||||||||||| ||||||||||||| | | Sbjct 44770 GGTCTCGAACCGGCGACCTTTCGGTTATTAGCCGAATGCTCTAACCAACTGAGCTATAGG 44829 Query 137052 TCCT 137055 ||| Sbjct 44830 ACCT 44833 >seq212 Length=330657 Score = 84.2 bits (92), Expect = 2e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 136992 GGTCTCGAACCTGCGACCGTTCGGTTATGAGCCGAATGCTCTGACCAACTGAGCTAAACG 137051 ||||||||||| |||||| ||||||||| ||||||||||||| ||||||||||||| | | Sbjct 110153 GGTCTCGAACCGGCGACCTTTCGGTTATTAGCCGAATGCTCTAACCAACTGAGCTATAGG 110094 Query 137052 TCCT 137055 ||| Sbjct 110093 ACCT 110090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 454495065467520