Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F002019455.1_202017-03- 06] 1,291 sequences; 42,346,107 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq548 87.8 2e-11 >seq548 Length=147261 Score = 87.8 bits (96), Expect = 2e-11 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 1628448 CATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTT 1628507 |||||||||||| |||||| || ||||||||| | || || |||||||||| Sbjct 105890 CATAAAGAGGTCCGGAACCCACAGGGCCGGAAAGAGGTCCCTGGCGCGCATCTCCTCCTT 105831 Query 1628508 GCCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTA 1628567 || || || ||| || || || | |||| ||||| | ||||| ||||||| ||| Sbjct 105830 CCCATGATTTTTTCGGATATCCAGAAACTCGAAGATGTCTGAATGCCAGGGCTCCACGTA 105771 Query 1628568 GCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 1628600 |||| | ||||||||||||||||||||| Sbjct 105770 CACTGCAAGGCTGCCCTTGCGCTTGCCGCCGCC 105738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107033254494247