Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F002019455.1_202017-03- 06] 1,291 sequences; 42,346,107 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq961 91.5 2e-12 >seq961 Length=12354 Score = 91.5 bits (100), Expect = 2e-12 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 796213 CTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGCGAG 796272 || || ||||||||||| || || ||||| || ||||| |||| || | | | || Sbjct 5148 CTTGCAGCGAAAAAGGCAAGCACATGCTTAATGAAGTGCTGCTCATCCTTGTTCAGACTT 5207 Query 796273 ACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGCCTCG 796332 |||||| ||| ||| | ||||||| ||||||||| |||||||| |||||||| Sbjct 5208 TCCCAGTCTACCAAGTCCCTGTGTAGGTCGATCTCCTCGGCTGTCCAAAAAGAGGCCTCC 5267 Query 796333 GCCTTTTTGTACATCTCCCA 796352 ||||| || ||||| ||||| Sbjct 5268 GCCTTCTTATACATATCCCA 5287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916109070441749