Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F002019455.1_202017-03- 06] 1,291 sequences; 42,346,107 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq65 84.2 3e-11 >seq65 Length=305635 Score = 84.2 bits (92), Expect = 3e-11 Identities = 157/227 (69%), Gaps = 3/227 (1%) Strand=Plus/Minus Query 146922 GGGCTCCAC-GTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCG 146980 ||||| | | |||||| || || | || | | || ||| ||| || || || |||| Sbjct 84221 GGGCTTCTCTGTGGTTCAGATAAATATGTGTATTGCCGAGGCAGTGGACGAACTCTCCCG 84162 Query 146981 GCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGA 147040 || | | |||| | | ||||| |||| || ||||| |||||| || ||||||| Sbjct 84161 GCGTGAAGCCGCATATCTTGGCCAGCATGAGAGTCAGCAGAGAGTAGGAAGCGATGTTGA 84102 Query 147041 AGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAG-CTCCCCG 147099 | || || || || || | ||| | |||||||||| |||| ||||| || || Sbjct 84101 AAGGAACTCCAAGCCCTACGTCGCAGCTTCTCTGGTACATGAGGCAGGAGAGACTTCCAT 84042 Query 147100 TCGGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCAT 147146 ||| ||||||||||| | || | |||||| || ||||||||||| Sbjct 84041 TCGAG-ACGTAAAACTGACTCAACAAGTGGCAGGGAGGCAGCGCCAT 83996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583478583962400