Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F002019455.1_202017-03- 06] 1,291 sequences; 42,346,107 total letters Query= NC_028890.1 Length=162486 Score E Sequences producing significant alignments: (Bits) Value seq592 82.4 8e-11 seq308 82.4 8e-11 >seq592 Length=43743 Score = 82.4 bits (90), Expect = 8e-11 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 27082 TACGCCTTCTTAGCTCAGTTGGTAGAGCGATTGACTTGTAATCAATAGGTCGTGGGTTCG 27141 || |||| |||||| |||||||||| ||| |||| | |||||||| |||||||||||||| Sbjct 35227 TAGGCCTCCTTAGCACAGTTGGTAGTGCGTTTGATTCGTAATCAAAAGGTCGTGGGTTCG 35168 Query 27142 AATCCTACAG 27151 | ||| |||| Sbjct 35167 ATTCCCACAG 35158 >seq308 Length=46184 Score = 82.4 bits (90), Expect = 8e-11 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 27084 CGCCTTCTTAGCTCAGTTGGTAGAGCGATTGACTTGTAATCAATAGGTCGTGGGTTCGAA 27143 ||||| |||||| |||||||||| ||| |||| | |||||||| ||||||||||||||| Sbjct 19831 CGCCTCCTTAGCACAGTTGGTAGTGCGTTTGATTCGTAATCAAAAGGTCGTGGGTTCGAT 19772 Query 27144 TCCTACAG 27151 ||| |||| Sbjct 19771 TCCCACAG 19764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 519818811288560