Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F002019465.1_202017-03- 06] 1,247 sequences; 43,895,689 total letters Query= NC_007497.1 Length=44856 Score E Sequences producing significant alignments: (Bits) Value seq236 86.0 2e-12 >seq236 Length=763 Score = 86.0 bits (94), Expect = 2e-12 Identities = 145/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 42620 AGAAAACGAATGCCCCGCGACTCGTAGACCGACTGGCCCTGC-GCGGGCGGATTGAGCGC 42678 || || || ||||| |||| ||||||| || |||| | | | || ||| || | | Sbjct 267 AGGAAGCGCATGCCGCGCGTTTCGTAGATGGA-TGGCGCGTCAGTGGCCGGGTTCATTGA 325 Query 42679 CATGAGCGAGACTGCGTTAAACAGCGCCATCAGCGGGTCGATCTTGGCGGTCCC-GCTCA 42737 ||| |||| || ||||||||| ||||||||||||||||||||| | ||||| ||| Sbjct 326 CATCAGCGTCACAGCGTTAAACGTCGCCATCAGCGGGTCGATCTTTCCCGTCCCTGCT-G 384 Query 42738 CCTGCTTGGTGATGTTCACTGCGTTCCCGACCGGAACGACTCGCGCATTTCCAACTGCCC 42797 | || || || || |||| ||||| || ||| | || |||||| || || || Sbjct 385 CTTGTTTTGTAATCATCACGGCGTTGCCTCGCGGCTCTACCTTCGCATTGCCTACGCACC 444 Query 42798 ACGTCAACAGTGGTTGGCCGCCGTG 42822 ||| || ||| || || |||| ||| Sbjct 445 ACGCCATCAGCGGCTGTCCGCTGTG 469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143415476254252