Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F002019465.1_202017-03- 06] 1,247 sequences; 43,895,689 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq409 87.8 2e-12 >seq409 Length=48402 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 114170 CAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATC 114229 || ||| ||||| | || || || || |||||||||||||| | || | ||| Sbjct 48237 CAGAACCAAATGAAGGGTTGACTCCTTCTGAATGTTGTAATCAGAAAGTGTCCTGCCATC 48178 Query 114230 TTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTC 114289 || || || || || || | ||||||||||| || || |||||||||||||| || || Sbjct 48177 CTCCAGCTGCTTGCCGGCAAAAATGAGACGCTGCTGATCAGGAGGAATGCCTTCCTTATC 48118 Query 114290 GGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGT 114349 |||||| || | | ||| | ||| || | | || || |||| || | || Sbjct 48117 CTGGATCTTTGCCTTCACATTTTCGATGGTATCTGATGGCTCAACATCCAGAGTAATGGT 48058 Query 114350 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||| || || ||||| || ||||| |||||||| Sbjct 48057 TTTCCCTGTGAGAGTCTTGACAAAGATCTGCAT 48025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420128014876164