Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F002019465.1_202017-03- 06] 1,247 sequences; 43,895,689 total letters Query= NC_027335.1 Length=145518 Score E Sequences producing significant alignments: (Bits) Value seq417 84.2 2e-11 seq283 84.2 2e-11 >seq417 Length=137015 Score = 84.2 bits (92), Expect = 2e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 102472 AGGACGTTTAGCTCAGTTGGTCAGAGCATTCGGCTCATAACCGAACGGTCGCAGGTTCGA 102531 ||| | | ||||||||||||| ||||||||||||| ||||||||| |||||| ||||||| Sbjct 92163 AGGTCCTATAGCTCAGTTGGTTAGAGCATTCGGCTAATAACCGAAAGGTCGCCGGTTCGA 92222 Query 102532 GACC 102535 |||| Sbjct 92223 GACC 92226 >seq283 Length=264354 Score = 84.2 bits (92), Expect = 2e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 102472 AGGACGTTTAGCTCAGTTGGTCAGAGCATTCGGCTCATAACCGAACGGTCGCAGGTTCGA 102531 ||| | | ||||||||||||| ||||||||||||| ||||||||| |||||| ||||||| Sbjct 110205 AGGTCCTATAGCTCAGTTGGTTAGAGCATTCGGCTAATAACCGAAAGGTCGCCGGTTCGA 110264 Query 102532 GACC 102535 |||| Sbjct 110265 GACC 110268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 465522343557360