Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F002019475.1_202017-03- 06] 1,594 sequences; 41,397,365 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq821 96.9 7e-15 >seq821 Length=182493 Score = 96.9 bits (106), Expect = 7e-15 Identities = 58/61 (95%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 142058 TGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACCCCCGC 142117 |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| Sbjct 63872 TGTGGCGCAATGGATAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAGTCCCGC 63931 Query 142118 C 142118 | Sbjct 63932 C 63932 Score = 91.5 bits (100), Expect = 3e-13 Identities = 58/62 (94%), Gaps = 1/62 (2%) Strand=Plus/Plus Query 142058 TGTGGCGCAAT-GGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACCCCCG 142116 ||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct 63202 TGTGGCGCAATCGGATAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAGTCCCG 63261 Query 142117 CC 142118 || Sbjct 63262 CC 63263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027815808360554