Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F002019475.1_202017-03- 06] 1,594 sequences; 41,397,365 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq243 107 8e-18 seq1356 98.7 4e-15 seq1563 96.9 1e-14 >seq243 Length=644 Score = 107 bits (118), Expect = 8e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || || || |||||||| || || || || | || ||||| |||| Sbjct 117 ATGCAGATATTTGTGAAGACTCTGACTGGCAAGACAATCACATTGGACGTTGAGCCATCA 176 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||| ||| | | || ||| || || ||||||||||| |||||||||||||| Sbjct 177 GATACCATCGAAAATGTGAAGGCAAAGATCCAGGATAAGGAAGGCATTCCTCCTGATCAG 236 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | ||||| | || || || || || || || || || | | ||||| || Sbjct 237 CAGCGTCTCATTTTTGCCGGCAAGCAGCTGGAGGACGGCAGGACACTTTCTGATTACAAC 296 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 ||| | ||||| |||| ||||| || || Sbjct 297 ATTCAGAAGGAGTCAACCCTTCATTTGGT 325 >seq1356 Length=16176 Score = 98.7 bits (108), Expect = 4e-15 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 391095 GATGTTGAATCATCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGA 391154 || ||||| |||| |||| ||| ||| | | || ||| ||||| ||||||||||| Sbjct 16159 GACGTTGAGCCATCAGATACCATCGAAAATGTGAAGGCAAAGATTCAGGATAAGGAAGGC 16100 Query 391155 ATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACT 391214 |||||||||||||| || ||| | ||||| | || || || || || ||||| || || Sbjct 16099 ATTCCTCCTGATCAGCAGCGTCTCATTTTTGCCGGCAAGCAGCTGGAGGATGGCAGGACA 16040 Query 391215 TTGGCGGATTATAATATTGATAAGGATGCAACACTTCACTTAGT 391258 | | ||||| || ||| | ||||| |||| ||||| || || Sbjct 16039 CTTTCTGATTACAACATTCAGAAGGAGTCAACCCTTCATTTGGT 15996 >seq1563 Length=156094 Score = 96.9 bits (106), Expect = 1e-14 Identities = 100/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 451320 ATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATG 451379 |||| || |||||||||| || |||||||||||||||||||| |||||||| || || | Sbjct 7040 ATGCGGTTGTTACTGTTCCTGCATATTTCAATGATGCACAACGCCAAGCAACAAAGGACG 7099 Query 451380 CAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTC 451439 |||| || || || | ||||| | || || | ||||| || || || |||||| Sbjct 7100 CAGGCGCAATCGCGGGGCTTAATGTAATCCGTATCCTCAATGAGCCCACTGCGGCTGCTA 7159 Query 451440 TAGCATATGGA 451450 | ||||||||| Sbjct 7160 TTGCATATGGA 7170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975678049656152