Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F002019475.1_202017-03- 06] 1,594 sequences; 41,397,365 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq754 331 1e-85 >seq754 Length=117916 Score = 331 bits (366), Expect = 1e-85 Identities = 1001/1531 (65%), Gaps = 34/1531 (2%) Strand=Plus/Minus Query 6635 CCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCAGCACTT 6694 |||||||| ||||||||||| |||| | |||||| || | | ||| || ||| | Sbjct 68954 CCCTTATCGTTCGTAATCGTGATCTGGTTGGATTTCCCAGTGTTCTTTTCGGTGGCAGTG 68895 Query 6695 ACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTC 6754 || |||| || ||||||||||||| |||||| | || | ||||| || || || | Sbjct 68894 ACGTTCATGATGCCATTTGCATCAATATCGAAGGTGACTTCGATTTGAGGG--ACGCCAC 68837 Query 6755 GGTGCGGCTGGA---ATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCC 6811 || | ||| ||| || || || | || | || | | |||||||| | | | Sbjct 68836 GGGG-GGCAGGAGGGATTCCATCCAAGTGGAACTTGCCCAAGAGGTTGTTATCCTTGGTC 68778 Query 6812 TTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTT 6871 | |||||| |||||| |||||| ||| ||| | || || || ||| || Sbjct 68777 ATGGCACGTTCTCCTTCAAAGACTTGAATCAACACTCCTGGCTGGTTGTCTGCGTAGGTG 68718 Query 6872 GAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATA 6931 | ||||| || ||||| | || || || || || | | || | | ||||| Sbjct 68717 GTGAAGACCTGGGACTTCTTGGTGGGGATGGTGGTGTTGCGCTCGATCAACTTCGTCATG 68658 Query 6932 ATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCT 6991 | || || ||| || | ||||| || || || | ||||| | || | || || Sbjct 68657 ACGCCTCCAGCAGTCTCCAACCCAAGCGAGAGTGGCGCTACGTCTAGCAGCAGAAGATCC 68598 Query 6992 TGAAC---AGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTAT 7048 || || ||| | ||| | |||| | | |||||||| || || | || |||||| Sbjct 68597 TGTACCTGAGAGTTGTTGAC---ACCCTTGAGAATGGCGGCCTGCACTGCAGCACCGTAT 68541 Query 7049 GCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCC--G 7106 || || |||||||| ||||| || | | || || | || || | ||| | Sbjct 68540 GCCACGGCCTCATCCGGGTTGATGGAACGGCAGGGCTCCTTGTCATTGAAGAACTCCTGG 68481 Query 7107 ATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCA 7166 |||| | || ||||| || || || || || || || |||||||| || | || | || Sbjct 68480 ATAA--TCTGCTGAATCTTGGGAATACGGGTAGACCCTCCGACCAAGACAACCTCGTGCA 68423 Query 7167 CTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTAC 7226 | | || ||||| | ||| | || || || || | | | | | | Sbjct 68422 CACTGCGCTTGTCGATGGCAGCGTCCTTCAACACCTTCTCCACTGGCACAAGAGAACTCC 68363 Query 7227 GGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAA 7286 ||| | ||||| || || ||||| |||||||| |||| || ||| | |||||| Sbjct 68362 TGAAGTAATCCATGCAGAGCTCCTCGAAACGTGCCCGGGAAAGAGATACGGAATAATCAA 68303 Query 7287 CGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTG--TGCCG-TCGAAGATAACGTTC 7343 ||| || | | |||||| || || ||||| | || ||| | |||| | || | Sbjct 68302 TGCCTTCAAACAGCGAATCGATCTCGATGGTGGCCTGGGTGCTGCTCGAG---AGGGTGC 68246 Query 7344 GCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATAT 7403 |||| || | |||||| || || | || | || ||||| ||| ||| || || Sbjct 68245 GCTTCGCTCTCTCACATTGAGTGCGCAGGCGTCTTAGAGCACGGCTGTTGCCGCTAAGAT 68186 Query 7404 CTTT-CTT--ATGTTTACGTTTAAACTCTT-CAG--AGAAGTGTCGAAGGAGTCTCGAAT 7457 | || ||| || || || || || || | || |||||| | |||||| | Sbjct 68185 CCTTGCTTCGATTCTTCCGCTTGAAATCCTGCATGCAGAAGTCC---ACGAGTCTGTTGT 68129 Query 7458 CGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTC 7517 |||| || || |||||||| || ||||| || || || || ||||| |||||||| || Sbjct 68128 CGAAGTCCTCTCCACCCAAATGGGTATCACCAGCTGTAGCCTTGACCTCAAAGATGCCGT 68069 Query 7518 CTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGT 7577 | || ||| | | || ||||||||||| || |||||||||| ||| || ||||| || | Sbjct 68068 CCTCGATGGTAAGCAGGGAAACATCAAATGTGCCACCACCCATGTCGAAGATGAGGACAT 68009 Query 7578 TCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCAT 7637 || | || | | | ||||| || ||||| || || || || || ||||| || || | Sbjct 68008 TCATTTCACCCTGTCCCTTCTTGTCCAGACCATAGGCTATGGCTGCAGCCGTAGGCTCGT 67949 Query 7638 TAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTT 7697 |||| ||||||||| |||||| || |||||||| | || || || || || || || | Sbjct 67948 TAATGATACGAAGAACGTTCAGACCCGCAATAGTGCCGGCGTCCTTTGTGGCCTGGCGCT 67889 Query 7698 GCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGAT 7757 | |||||||| ||||| ||||| || || | || || ||| | |||| || || | Sbjct 67888 GAGAATCGTTGAAGTATGCCGGTACTGTAATAACGGCCTCCTTAACTTCTTTGCCAACGA 67829 Query 7758 ACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAA 7817 |||| || || || || ||||| || || ||||| | ||||| || || | || Sbjct 67828 ACGACTCGGCAATTTCCTTCATCTTCACCAGCACCATGGCGGAAATTTCCTCCGGATGAA 67769 Query 7818 ACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGA 7877 | ||||| |||| | | | |||||||| | || ||| || | || | Sbjct 67768 AAGTCTTCGTAGCACCTTGGTAGTTCACTTCAATAAGTGGCTTACCCCCGCTTCCAGCCT 67709 Query 7878 TAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTC 7937 | ||| | ||| ||| | ||||| || || ||| |||| ||||| | || Sbjct 67708 TGACCGTGAACGGCCAGTGCTTCATGTCCGACTGCACCGCGGGGTCATCGAACTTCCGTC 67649 Query 7938 CGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCG 7997 | || |||||||| || |||||||| ||||||| ||||||| | || ||||| |||| Sbjct 67648 CAATGAGACGCTTCGCGTCAAAAACGGTGTTTTCGGGGTTCCTCGCCACCTGGTTTTTCG 67589 Query 7998 CCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTC 8057 | ||||| || | || || || | || || || ||||| || || ||||| |||| Sbjct 67588 CGGCGTCGCCCACCAGTCGCTC---TGTGTCGGTGAATGCGACATAGGAAGGGGTGGTTC 67532 Query 8058 GATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACG 8117 || || ||||||||||| || || || |||| ||||| | ||| || || ||||| | Sbjct 67531 TGTTACCCTGGTCGTTCGCTATGATCTCGACGCCTTCGTTCTTCCATACACCCACGCAAG 67472 Query 8118 AATACGTTGTTCCTAAATCAATACCGATTGC 8148 | || || || || | || || || | ||| Sbjct 67471 AGTATGTGGTGCCAAGGTCGATGCCAACTGC 67441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635120144978960