Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F002019475.1_202017-03- 06] 1,594 sequences; 41,397,365 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq33 87.8 3e-12 >seq33 Length=64344 Score = 87.8 bits (96), Expect = 3e-12 Identities = 122/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 222031 GACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTG 222090 ||| | || ||| ||||||||||| | |||||| ||| ||||||| || |||| ||| Sbjct 22762 GACGCGCTCCATAAAGAGGTCCGGAACCCACAGGGCCGGAAAGAGGTCCCTGGCGCGCAT 22703 Query 222091 CTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGG 222150 ||||||| || | ||||| | | ||||| |||||| || ||||| | ||||| || Sbjct 22702 CTCCTCCTTCCCATGATTTTTTCGGATATCCAGAAACTCGAAGATGTCTGAATGCCAGGG 22643 Query 222151 CTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCAC 222201 ||||| || || || || ||| |||||| ||| || || || || Sbjct 22642 CTCCACGTACACTGCAAGGCTGCCCTTGCGCTTGCCGCCGCCTTGGTCGAC 22592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928826292767360