Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F002019475.1_202017-03- 06] 1,594 sequences; 41,397,365 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq1383 86.0 5e-12 >seq1383 Length=115434 Score = 86.0 bits (94), Expect = 5e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329 ||||||||||| || || ||||| | || || |||||||| || | || ||||||| Sbjct 113819 AAAATGCAAATCTTCGTGAAAACCCTCACGGGGAAAACCATCACGCTGGACGTGGAGCCT 113760 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 ||||| ||| | ||||| ||| || ||||| |||||| | || ||| Sbjct 113759 TCGGATACCATCGAAAATGTAAAGGCGAAAATCCAAGACAAGGAAGGCATTCCGCCTGAT 113700 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 || || | || |||| || || |||||||| ||||||| || || | |||||||| Sbjct 113699 CAGCAGCGTCTGATTTTCGCTGGAAAACAGCTCGAGGATGGGAGGACCCTCTCGGATTAC 113640 Query 110450 AACATTCAAAAAGAA 110464 ||||| || || ||| Sbjct 113639 AACATCCAGAAGGAA 113625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412833579777842