Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F002019475.1_202017-03- 06] 1,594 sequences; 41,397,365 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq243 96.9 3e-15 seq1356 86.0 6e-12 >seq243 Length=644 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 137194 AAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTC 137253 ||||||| ||| ||||||| || || || || || ||||||||||| | ||| || Sbjct 334 AAACGCAGAACCAAATGAAGGGTTGACTCCTTCTGAATGTTGTAATCAGAAAGTGTCCTG 275 Query 137254 GAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCT 137313 ||| || || || || || ||| | || ||||| |||||||| ||||| |||||||| Sbjct 274 CCGTCCTCCAGCTGCTTGCCGGCAAAAATGAGACGCTGCTGATCAGGAGGAATGCCTTCC 215 Query 137314 TTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTC 137373 || || || ||| || | | ||| | || |||| || || || || | || Sbjct 214 TTATCCTGGATCTTTGCCTTCACATTTTCGATGGTATCTGATGGCTCAACGTCCAATGTG 155 Query 137374 ACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 | |||||||| |||| || || || ||||| ||||| Sbjct 154 ATTGTCTTGCCAGTCAGAGTCTTCACAAATATCTGCAT 117 >seq1356 Length=16176 Score = 86.0 bits (94), Expect = 6e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 137182 TGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCG 137241 || || ||||||| ||||| ||| ||||||| || || || || || ||||||||||| Sbjct 15975 TGCCCGCCTCGTAGACGCAGAACCAAATGAAGGGTTGACTCCTTCTGAATGTTGTAATCA 16034 Query 137242 CTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 137301 | ||| || || || || || || || ||| | || ||||| |||||||| ||| Sbjct 16035 GAAAGTGTCCTGCCATCCTCCAGCTGCTTGCCGGCAAAAATGAGACGCTGCTGATCAGGA 16094 Query 137302 GGTATGCCTTCTTTGTC 137318 || |||||||| || || Sbjct 16095 GGAATGCCTTCCTTATC 16111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488534265760800