Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F002019475.1_202017-03- 06] 1,594 sequences; 41,397,365 total letters Query= NC_027335.1 Length=145518 Score E Sequences producing significant alignments: (Bits) Value seq1401 84.2 2e-11 seq1082 84.2 2e-11 >seq1401 Length=40160 Score = 84.2 bits (92), Expect = 2e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 102472 AGGACGTTTAGCTCAGTTGGTCAGAGCATTCGGCTCATAACCGAACGGTCGCAGGTTCGA 102531 ||| | | ||||||||||||| ||||||||||||| ||||||||| |||||| ||||||| Sbjct 18727 AGGTCCTATAGCTCAGTTGGTTAGAGCATTCGGCTAATAACCGAAAGGTCGCCGGTTCGA 18668 Query 102532 GACC 102535 |||| Sbjct 18667 GACC 18664 >seq1082 Length=138743 Score = 84.2 bits (92), Expect = 2e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 102472 AGGACGTTTAGCTCAGTTGGTCAGAGCATTCGGCTCATAACCGAACGGTCGCAGGTTCGA 102531 ||| | | ||||||||||||| ||||||||||||| ||||||||| |||||| ||||||| Sbjct 92107 AGGTCCTATAGCTCAGTTGGTTAGAGCATTCGGCTAATAACCGAAAGGTCGCCGGTTCGA 92166 Query 102532 GACC 102535 |||| Sbjct 92167 GACC 92170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 465520324322720