Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F002019905.1_202017-03- 06] 1,469 sequences; 43,010,379 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq509 82.4 8e-11 >seq509 Length=80777 Score = 82.4 bits (90), Expect = 8e-11 Identities = 100/133 (75%), Gaps = 5/133 (4%) Strand=Plus/Minus Query 16493 CTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCC 16552 ||||| | || ||||| |||||||| | ||| | || ||| ||||||| | || ||| Sbjct 8744 CTGTATGTCTCGGAGTGGATGTTCTCCACGGCAAGTTGGAATGCATAGAAACTGCGCGCC 8685 Query 16553 TCCGCTATTTGTACTTCCACGTAA--AATCGTTCCGCCAGGTTCTCATTCACGATACCGT 16610 |||| |||||||||||| ||| | || | || |||| ||| || | ||||| |||| Sbjct 8684 TCCGGTATTTGTACTTC--CGTCATGAACCTCTCGGCCAAGTTTTCCATGACGATTCCGT 8627 Query 16611 CACTTGCAGCAAA 16623 ||| ||||||||| Sbjct 8626 CAC-TGCAGCAAA 8615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511405009153080