Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F002019905.1_202017-03- 06] 1,469 sequences; 43,010,379 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq785 104 2e-17 >seq785 Length=51992 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055 |||||||| || ||||| |||||| | || || ||| |||| || | || || ||| | Sbjct 306 ACAATGCAGATCTTTGTCAAGACTCTCACAGGGAAAACCATTACTCTGGATGTTGAGCCA 247 Query 25056 TCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || || || ||||| ||||| ||| ||| || || ||||| ||||| ||||| Sbjct 246 TCAGATACCATCGAAAATGTGAAGGCAAAGATCCAGGATAAGGAAGGCATTCCTCCTGAT 187 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||||| | |||||||||||||| || | || |||| | || | |||||| Sbjct 186 CAGCAGCGTCTCATTTTTGCCGGCAAGCAGCTGGAGGATGGCAGGACACTTTCTGATTAC 127 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || ||||| || || || || || ||||| || || Sbjct 126 AACATTCAGAAGGAGTCAACCCTTCATTTGGTTCT 92 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433320241939235