Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F002019905.1_202017-03- 06] 1,469 sequences; 43,010,379 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq785 127 8e-24 seq1077 98.7 4e-15 seq847 96.9 1e-14 >seq785 Length=51992 Score = 127 bits (140), Expect = 8e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || || || || || || || || ||||| |||||||| |||||||| |||| Sbjct 304 AATGCAGATCTTTGTCAAGACTCTCACAGGGAAAACCATTACTCTGGATGTTGAGCCATC 245 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 |||| ||| ||| | | || ||| || || ||||||||||| |||||||||||||| Sbjct 244 AGATACCATCGAAAATGTGAAGGCAAAGATCCAGGATAAGGAAGGCATTCCTCCTGATCA 185 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 || ||| | ||||| | || || || || || ||||| || || | | ||||| || Sbjct 184 GCAGCGTCTCATTTTTGCCGGCAAGCAGCTGGAGGATGGCAGGACACTTTCTGATTACAA 125 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGT 391258 ||| | ||||| |||| ||||| || || Sbjct 124 CATTCAGAAGGAGTCAACCCTTCATTTGGT 95 >seq1077 Length=15226 Score = 98.7 bits (108), Expect = 4e-15 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 391095 GATGTTGAATCATCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGA 391154 || ||||| |||| |||| ||| ||| | | || ||| ||||| ||||||||||| Sbjct 5 GACGTTGAGCCATCAGATACCATCGAAAATGTGAAGGCAAAGATTCAGGATAAGGAAGGC 64 Query 391155 ATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACT 391214 |||||||||||||| || ||| | ||||| | || || || || || ||||| || || Sbjct 65 ATTCCTCCTGATCAGCAGCGTCTCATTTTTGCCGGCAAGCAGCTGGAGGATGGCAGGACA 124 Query 391215 TTGGCGGATTATAATATTGATAAGGATGCAACACTTCACTTAGT 391258 | | ||||| || ||| | ||||| |||| ||||| || || Sbjct 125 CTTTCTGATTACAACATTCAGAAGGAGTCAACCCTTCATTTGGT 168 >seq847 Length=123647 Score = 96.9 bits (106), Expect = 1e-14 Identities = 100/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 451320 ATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATG 451379 |||| || |||||||||| || |||||||||||||||||||| |||||||| || || | Sbjct 25156 ATGCGGTTGTTACTGTTCCTGCATATTTCAATGATGCACAACGCCAAGCAACAAAGGACG 25215 Query 451380 CAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTC 451439 |||| || || || | ||||| | || || | ||||| || || || |||||| Sbjct 25216 CAGGCGCAATCGCGGGGCTTAATGTAATCCGTATCCTCAATGAGCCCACTGCGGCTGCTA 25275 Query 451440 TAGCATATGGA 451450 | ||||||||| Sbjct 25276 TTGCATATGGA 25286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975681213892652