Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F002019905.1_202017-03- 06] 1,469 sequences; 43,010,379 total letters Query= NC_018854.1 Length=69855 Score E Sequences producing significant alignments: (Bits) Value seq490 104 1e-17 >seq490 Length=866 Score = 104 bits (114), Expect = 1e-17 Identities = 115/151 (76%), Gaps = 2/151 (1%) Strand=Plus/Minus Query 28818 TTTGACTCTGGTACTCCACCAGCAGTTAAACAGCTACGACATAAGCTGTTAATGGCTGGG 28877 |||||||| |||||||| | || ||||| ||| | || || ||||| | ||||||| Sbjct 487 TTTGACTCAGGTACTCCTGCTGCTGTTAAGCAGATGCGCCACAAGCTCCTGATGGCTGAT 428 Query 28878 TGTGGTTCAATCAACCTACAGATTGATGAAATTGGTTCAAACCTGTTGGCTAACACGGAT 28937 ||||||| |||| || |||||||||||||| || || || || |||| |||| |||| Sbjct 427 GCTGGTTCAGTCAATCTTCAGATTGATGAAATCGGATCCAATCTATTGGGTAACTTGGAT 368 Query 28938 GT-ATTAACTCTGTTCCTGGAATTATATGAC 28967 || | ||| | ||||||||| | |||||| Sbjct 367 GTGCTCAACAC-ATTCCTGGAACTCTATGAC 338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 223407200171544