Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F002019905.1_202017-03- 06] 1,469 sequences; 43,010,379 total letters Query= NC_019485.1 Length=59080 Score E Sequences producing significant alignments: (Bits) Value seq490 82.4 3e-11 >seq490 Length=866 Score = 82.4 bits (90), Expect = 3e-11 Identities = 152/218 (70%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 22340 GATGATGAACTTGTTGCTGTACAGAAAGAGTTTAATTCTCTTGGTTCATTATTATTTT-C 22398 ||||| || ||||| |||| ||||||||||| || || || || | |||| | Sbjct 547 GATGAAGAGCTTGTACGTGTAGAGAAAGAGTTTGATCAACTAGGGCCACTGGTATTCAAC 488 Query 22399 ATTCAGTGAAGGTACATCTCCGGCTGTTAAGCAAATGCGACATAAAGTGCTTATGGCTGA 22458 || | | | ||||| || | ||||||||||| ||||| || || | || |||||||| Sbjct 487 TTTGACTCA-GGTACTCCTGCTGCTGTTAAGCAGATGCGCCACAAGCTCCTGATGGCTGA 429 Query 22459 GTGC-GGTGCAATTAACTTTGAAATGGATGAAATGGGTTCTAACTTAATGGGTAACATTG 22517 ||| ||| || | || || | || |||||||| || || || || |||||||| | | Sbjct 428 -TGCTGGTTCAGTCAATCTTCAGATTGATGAAATCGGATCCAATCTATTGGGTAACTTGG 370 Query 22518 AAGTTTTAACCACATTTTTAGAATTGTACGATGTAGGC 22555 | || | | |||||| | ||| | || || || ||| Sbjct 369 ATGTGCTCAACACATTCCTGGAACTCTATGACGTTGGC 332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 188931104157476